RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 RD3LP0DJH9 198 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 PSG1P11464 419 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 HOXA5P20719 270 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 RPL29P47914 159 aaKnown RBP7.14□□□□□ -1.27
NEDD9-215ENST00000514660 ATP5G3P48201 142 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 ZNF266Q14584 549 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 SLC51BQ86UW2 128 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 BAP18Q8IXM2 172 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 BPIFCQ8NFQ6 507 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 STOML3Q8TAV4 291 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 RNF125Q96EQ8 232 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 TMEM70Q9BUB7 260 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 SH3BGRL3Q9H299 93 aa7.14□□□□□ -1.27
NEDD9-215ENST00000514660 SEPSECSQ9HD40 501 aaKnown RBP7.14□□□□□ -1.27
NEDD9-215ENST00000514660 TRAV26-1A0A087WT03 109 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 CBY3A6NI87 242 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 BUB3O43684 328 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 SNRPD3P62318 126 aaKnown RBP7.13□□□□□ -1.27
NEDD9-215ENST00000514660 PSG9Q00887 426 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 RAB31Q13636 194 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 FAM78BQ5VT40 261 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 PATE2Q6UY27 113 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 FOXI2Q6ZQN5 318 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 RXFP4Q8TDU9 374 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 Q8WTZ3 238 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 C20orf173Q96LM9 149 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 PSMG3Q9BT73 122 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-215ENST00000514660 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 SLC39A9Q9NUM3 307 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 TIMM9Q9Y5J7 89 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 PXMP4Q9Y6I8 212 aa7.13□□□□□ -1.27
NEDD9-215ENST00000514660 PKHD1L1Q86WI1 4243 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 A8MTW9 85 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 TPT1P13693 172 aaKnown RBP7.12□□□□□ -1.27
NEDD9-215ENST00000514660 PLP1P60201 277 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 SELENOTP62341 195 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 EIF5AP63241 154 aaKnown RBP7.12□□□□□ -1.27
NEDD9-215ENST00000514660 GCSAMLQ5JQS6 135 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 OR51G1Q8NGK1 321 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 OR2G3Q8NGZ4 309 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 TMEM37Q8WXS4 190 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 GNPNAT1Q96EK6 184 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-215ENST00000514660 IGF2BP2-AS1Q96M15 143 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 LINC00052Q96N35 136 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 SLC25A32Q9H2D1 315 aa7.12□□□□□ -1.27
NEDD9-215ENST00000514660 A0A0J9YX75 114 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 C17orf112F2Z3M2 114 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 OXTP01178 125 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 PLA2G1BP04054 148 aaKnown RBP7.11□□□□□ -1.27
NEDD9-215ENST00000514660 FABP1P07148 127 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 SEC11BP0C7V7 166 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 B2MP61769 119 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 SERF2P84101 59 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 FFAR4Q5NUL3 377 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 SIGLEC15Q6ZMC9 328 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 DNAJC4Q9NNZ3 241 aa7.11□□□□□ -1.27
NEDD9-215ENST00000514660 M0R2Z0 102 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-215ENST00000514660 HYPMO75409 117 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 SCGB2A1O75556 95 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 IL4P05112 153 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 ORM2P19652 201 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 TSPOP30536 169 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 RAB2AP61019 212 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 LYZP61626 148 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 IFITM2Q01629 132 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 OR5I1Q13606 314 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 Q6ZRG5 221 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 TMED6Q8WW62 240 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 RPRMQ9NS64 109 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 DOK5Q9P104 306 aa7.1□□□□□ -1.27
NEDD9-215ENST00000514660 A0A096LPF7 62 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 SPINK13Q1W4C9 94 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 LCE2AQ5TA79 106 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-215ENST00000514660 PXDC1Q5TGL8 231 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 MORN5Q5VZ52 161 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 SPATA31B1PQ5VZV4 182 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 TEX261Q6UWH6 196 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 ZNF680Q8NEM1 530 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 OR1B1Q8NGR6 318 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 VSIG2Q96IQ7 327 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 PBDC1Q9BVG4 233 aa7.09□□□□□ -1.27
NEDD9-215ENST00000514660 TRAV5A0A0B4J249 113 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 EIF3GO75821 320 aaKnown RBP eCLIP7.08□□□□□ -1.28
NEDD9-215ENST00000514660 OR5G3P0C626 314 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 M6PRP20645 277 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 ASIPP42127 132 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 FHITP49789 147 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 SULT1A2P50226 295 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 ZNF726P1Q15940 193 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 ACOT6Q3I5F7 207 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-215ENST00000514660 FAM74A1Q5RGS3 127 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 ALKAL2Q6UX46 152 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 Q6ZSA8 131 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 LINC00612Q8N6U2 182 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 OR10G4Q8NGN3 311 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 OR10G9Q8NGN4 311 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 OR10G7Q8NGN6 311 aa7.08□□□□□ -1.28
NEDD9-215ENST00000514660 PHYHIPLQ96FC7 376 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms