RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 ZNF705FA8MVS1 300 aaPredicted RBP14.84□□□□□ -0.03
SSBP2-218ENST00000514493 S100PP25815 95 aa14.84□□□□□ -0.03
SSBP2-218ENST00000514493 IBA57Q5T440 356 aaKnown RBP14.84□□□□□ -0.03
SSBP2-218ENST00000514493 DCANP1Q8TF63 244 aa14.84□□□□□ -0.03
SSBP2-218ENST00000514493 RNASE7Q9H1E1 156 aaKnown RBP14.84□□□□□ -0.03
SSBP2-218ENST00000514493 MS4A6AQ9H2W1 248 aa14.84□□□□□ -0.03
SSBP2-218ENST00000514493 BIN3Q9NQY0 253 aa14.84□□□□□ -0.03
SSBP2-218ENST00000514493 PFN1P07737 140 aaKnown RBP14.83□□□□□ -0.03
SSBP2-218ENST00000514493 PRB4P10163 310 aaPredicted RBP14.83□□□□□ -0.03
SSBP2-218ENST00000514493 KRTAP21-3Q3LHN1 58 aa14.83□□□□□ -0.03
SSBP2-218ENST00000514493 FAM231DQ6ZW35 169 aa14.83□□□□□ -0.03
SSBP2-218ENST00000514493 IMMP2LQ96T52 175 aa14.83□□□□□ -0.03
SSBP2-218ENST00000514493 RBAKDNA6NC62 111 aa14.83□□□□□ -0.04
SSBP2-218ENST00000514493 PRR27Q6MZM9 219 aa14.83□□□□□ -0.04
SSBP2-218ENST00000514493 KCNIP4Q6PIL6 250 aa14.83□□□□□ -0.04
SSBP2-218ENST00000514493 GBGT1Q8N5D6 347 aa14.83□□□□□ -0.04
SSBP2-218ENST00000514493 LINC00482Q8N8I6 264 aa14.83□□□□□ -0.04
SSBP2-218ENST00000514493 V9GYV3 84 aa14.83□□□□□ -0.04
SSBP2-218ENST00000514493 DNHD1Q96M86 4753 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 TRBV24-1A0A075B6N3 115 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 TGIF2-C20orf24A0A0A6YYL0 155 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 CXCL1P09341 107 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 RAB5AP20339 215 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 DEFB114Q30KQ6 69 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 C20orf173Q96LM9 149 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 ZNF747Q9BV97 191 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 SORL1Q92673 2214 aa14.81□□□□□ -0.04
SSBP2-218ENST00000514493 PRAC2D3DTV9 90 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 K7EQG2 157 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 TMEM61Q8N0U2 210 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 ZNF492Q9P255 531 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 STAB1Q9NY15 2570 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 PAFAH1B2P68402 229 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 VGLL1Q99990 258 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 IL36BQ9NZH7 164 aa14.8□□□□□ -0.04
SSBP2-218ENST00000514493 TRAV2A0A0B4J234 112 aa14.79□□□□□ -0.04
SSBP2-218ENST00000514493 ID1P41134 155 aa14.79□□□□□ -0.04
SSBP2-218ENST00000514493 TFPI2P48307 235 aa14.79□□□□□ -0.04
SSBP2-218ENST00000514493 CD300EQ496F6 205 aaPredicted RBP14.79□□□□□ -0.04
SSBP2-218ENST00000514493 SAPCD1Q5SSQ6 148 aa14.79□□□□□ -0.04
SSBP2-218ENST00000514493 RBPMS2Q6ZRY4 209 aaKnown RBP14.79□□□□□ -0.04
SSBP2-218ENST00000514493 WFDC3Q8IUB2 231 aa14.79□□□□□ -0.04
SSBP2-218ENST00000514493 ZNF738Q8NE65 137 aa14.79□□□□□ -0.04
SSBP2-218ENST00000514493 PYGO2Q9BRQ0 406 aa14.79□□□□□ -0.04
SSBP2-218ENST00000514493 A0A1W2PPQ1 181 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 ZNF705GA8MUZ8 300 aaPredicted RBP14.78□□□□□ -0.04
SSBP2-218ENST00000514493 NUDT10Q8NFP7 164 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 NUDT11Q96G61 164 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 ZC2HC1AQ96GY0 325 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 FAM210BQ96KR6 192 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 VWFP04275 2813 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 TRAV25A0A0B4J276 109 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 C19orf71A6NCJ1 209 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 GATCO43716 136 aaKnown RBP14.78□□□□□ -0.04
SSBP2-218ENST00000514493 SAP30O75446 220 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 LINC00322Q6ZN03 302 aaPredicted RBP14.78□□□□□ -0.04
SSBP2-218ENST00000514493 COX8CQ7Z4L0 72 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 Q8TAT8 98 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 PRR25Q96S07 402 aa14.78□□□□□ -0.04
SSBP2-218ENST00000514493 ASCL2Q99929 193 aa14.77□□□□□ -0.05
SSBP2-218ENST00000514493 NDFIP1Q9BT67 221 aa14.77□□□□□ -0.05
SSBP2-218ENST00000514493 CT45A10P0DMU9 189 aa14.76□□□□□ -0.05
SSBP2-218ENST00000514493 FAM3BP58499 235 aaPredicted RBP14.76□□□□□ -0.05
SSBP2-218ENST00000514493 SNRPD3P62318 126 aaKnown RBP14.76□□□□□ -0.05
SSBP2-218ENST00000514493 ERCC8Q13216 396 aa14.76□□□□□ -0.05
SSBP2-218ENST00000514493 C12orf54Q6X4T0 127 aa14.76□□□□□ -0.05
SSBP2-218ENST00000514493 DAZAP1Q96EP5 407 aaKnown RBP14.76□□□□□ -0.05
SSBP2-218ENST00000514493 BTF3L4Q96K17 158 aa14.76□□□□□ -0.05
SSBP2-218ENST00000514493 P01737 135 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 ZNF688P0C7X2 276 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 TMEM78Q5T7P6 136 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 C9orf47Q6ZRZ4 202 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 C3orf56Q8N813 242 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 C8orf49Q96NF6 230 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 SPAG8Q99932 426 aaPredicted RBP14.75□□□□□ -0.05
SSBP2-218ENST00000514493 TRAV9-1A0A075B6T8 112 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 IGLV1-51P01701 117 aa14.75□□□□□ -0.05
SSBP2-218ENST00000514493 RPP21Q9H633 154 aaKnown RBP14.75□□□□□ -0.05
SSBP2-218ENST00000514493 NPIPB6E9PJ23 425 aa14.74□□□□□ -0.05
SSBP2-218ENST00000514493 RPS10P46783 165 aaKnown RBP14.74□□□□□ -0.05
SSBP2-218ENST00000514493 ZNF138P52744 262 aa14.74□□□□□ -0.05
SSBP2-218ENST00000514493 CT83Q5H943 113 aa14.74□□□□□ -0.05
SSBP2-218ENST00000514493 SHISA2Q6UWI4 295 aa14.74□□□□□ -0.05
SSBP2-218ENST00000514493 OR2K2Q8NGT1 345 aa14.74□□□□□ -0.05
SSBP2-218ENST00000514493 GPR61Q9BZJ8 451 aa14.74□□□□□ -0.05
SSBP2-218ENST00000514493 AGPAT4-IT1Q9H0P7 198 aa14.74□□□□□ -0.05
SSBP2-218ENST00000514493 SMIM27A0A1W2PRY6 76 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 IZUMO1RA6ND01 250 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 CA1P00915 261 aaPredicted RBP14.73□□□□□ -0.05
SSBP2-218ENST00000514493 PSMG4Q5JS54 123 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 OR4B1Q8NGF8 309 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 PPP1R14DQ9NXH3 145 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 NOTCH3Q9UM47 2321 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 OR4C46A6NHA9 309 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 OR10J6PQ8NGY7 276 aa14.73□□□□□ -0.05
SSBP2-218ENST00000514493 TYMSP04818 313 aa14.72□□□□□ -0.05
SSBP2-218ENST00000514493 CRIP1P50238 77 aa14.72□□□□□ -0.05
SSBP2-218ENST00000514493 SMUG1Q53HV7 270 aa14.72□□□□□ -0.05
SSBP2-218ENST00000514493 TSKUQ8WUA8 353 aa14.72□□□□□ -0.05
SSBP2-218ENST00000514493 ZNF256Q9Y2P7 627 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 1130.8 ms