RNA–Protein interactions for RNA: ENST00000514382.5

CCND3-220, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-220ENST00000514382 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
CCND3-220ENST00000514382 HMGB3O15347 200 aaKnown RBP9.53□□□□□ -0.88
CCND3-220ENST00000514382 ARL14EPLP0DKL9 152 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 P0DMU3 169 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 FAM231AP0DMU4 169 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 FAM231CP0DMU5 169 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 FGF8P55075 233 aaPredicted RBP9.53□□□□□ -0.88
CCND3-220ENST00000514382 FAM222AQ5U5X8 452 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 UQCC3Q6UW78 93 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 MIR17HGQ75NE6 70 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 SSX7Q7RTT5 188 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 TMEM37Q8WXS4 190 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 SLC25A39Q9BZJ4 359 aaPredicted RBP9.53□□□□□ -0.88
CCND3-220ENST00000514382 NRN1Q9NPD7 142 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 DKK2Q9UBU2 259 aa9.53□□□□□ -0.88
CCND3-220ENST00000514382 H3BRN7 92 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 GCHFRP30047 84 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 PEA15Q15121 130 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 PATE2Q6UY27 113 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 SIGLEC15Q6ZMC9 328 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 FAM210AQ96ND0 272 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 UHRF2Q96PU4 802 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 SHANK2-AS3Q9BTD1 123 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 EIF5A2Q9GZV4 153 aaKnown RBP9.52□□□□□ -0.89
CCND3-220ENST00000514382 GNG13Q9P2W3 67 aa9.52□□□□□ -0.89
CCND3-220ENST00000514382 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
CCND3-220ENST00000514382 HTN3P15516 51 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 UBE2L3P68036 154 aaKnown RBP9.51□□□□□ -0.89
CCND3-220ENST00000514382 TNP2Q05952 138 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 GUK1Q16774 197 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 TOR2AQ5JU69 321 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 BPIFA4PQ86YQ2 179 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 SLC7A5P1Q8MH63 180 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 EIF4E3Q8N5X7 224 aaKnown RBP9.51□□□□□ -0.89
CCND3-220ENST00000514382 GPR82Q96P67 336 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 NEU1Q99519 415 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 PAXXQ9BUH6 204 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 SLC25A2Q9BXI2 301 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 SAV1Q9H4B6 383 aaPredicted RBP9.51□□□□□ -0.89
CCND3-220ENST00000514382 SMDT1Q9H4I9 107 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 ARL2-SNX15V9GYD0 113 aa9.51□□□□□ -0.89
CCND3-220ENST00000514382 RBFOX3A6NFN3 312 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 BCL2P10415 239 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 TMEM88Q6PEY1 159 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 LINC00052Q96N35 136 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 TXNDC17Q9BRA2 123 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 OR51M1Q9H341 326 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 TREM1Q9NP99 234 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 TMEM14CQ9P0S9 112 aa9.5□□□□□ -0.89
CCND3-220ENST00000514382 ZNF98A6NK75 572 aa9.49□□□□□ -0.89
CCND3-220ENST00000514382 SPART-AS1P0CW21 52 aa9.49□□□□□ -0.89
CCND3-220ENST00000514382 RPL7P18124 248 aaKnown RBP9.49□□□□□ -0.89
CCND3-220ENST00000514382 C1orf194Q5T5A4 169 aa9.49□□□□□ -0.89
CCND3-220ENST00000514382 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
CCND3-220ENST00000514382 LOC102723971A0A1B0GUV8 181 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 EIF3GO75821 320 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCND3-220ENST00000514382 SNRPD3P62318 126 aaKnown RBP9.48□□□□□ -0.89
CCND3-220ENST00000514382 CCL20P78556 96 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 ZNF506Q5JVG8 444 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 IGFL4Q6B9Z1 124 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 AMTNQ6UX39 209 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 UBE2DNLQ8IWF7 75 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 OR8I2Q8N0Y5 310 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 OR4B1Q8NGF8 309 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 SUN5Q8TC36 379 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 NIPSNAP3BQ9BS92 247 aa9.48□□□□□ -0.89
CCND3-220ENST00000514382 NKX6-2Q9C056 277 aaPredicted RBP9.48□□□□□ -0.89
CCND3-220ENST00000514382 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
CCND3-220ENST00000514382 TRAV5A0A0B4J249 113 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 ATP6V1G1O75348 118 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
CCND3-220ENST00000514382 OR10J4P0C629 311 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 HIST1H1EP10412 219 aaKnown RBP9.47□□□□□ -0.89
CCND3-220ENST00000514382 GALR1P47211 349 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 MEOX2P50222 304 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 MORN5Q5VZ52 161 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 C1QTNF4Q9BXJ3 329 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 TMPRSS5Q9H3S3 457 aa9.47□□□□□ -0.89
CCND3-220ENST00000514382 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 PLAC8L1A1L4L8 177 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 A8MTW9 85 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 CRXO43186 299 aaPredicted RBP9.46□□□□□ -0.9
CCND3-220ENST00000514382 PDE6DO43924 150 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 PAGE4O60829 102 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 PYYP10082 97 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 S100A1P23297 94 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 UBE2G2P60604 165 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 MEF2BQ02080 365 aaPredicted RBP9.46□□□□□ -0.9
CCND3-220ENST00000514382 FOXI2Q6ZQN5 318 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 RXFP4Q8TDU9 374 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 HERC1Q15751 4861 aa9.46□□□□□ -0.9
CCND3-220ENST00000514382 A0A0J9YX75 114 aa9.45□□□□□ -0.9
CCND3-220ENST00000514382 ZNF705GA8MUZ8 300 aaPredicted RBP9.45□□□□□ -0.9
CCND3-220ENST00000514382 KRBOX1C9JBD0 128 aa9.45□□□□□ -0.9
CCND3-220ENST00000514382 F6UZH7 168 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms