RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CT45A10P0DMU9 189 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 HLA-DMBP28068 263 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 NDUFA6P56556 154 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 RPS20P60866 119 aaKnown RBP6.36□□□□□ -1.39
RNF4-220ENST00000513578 Q6AWC8 147 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 C10orf99Q6UWK7 81 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 TMEM136Q6ZRR5 245 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 RBPMS2Q6ZRY4 209 aaKnown RBP6.36□□□□□ -1.39
RNF4-220ENST00000513578 Q6ZSV7 163 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 IL17RELQ6ZVW7 336 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 KLHDC1Q8N7A1 406 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 GATD1Q8NB37 220 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 NEU1Q99519 415 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 NDFIP1Q9BT67 221 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 NRN1Q9NPD7 142 aa6.36□□□□□ -1.39
RNF4-220ENST00000513578 MAP1AP78559 2803 aaPredicted RBP6.35□□□□□ -1.39
RNF4-220ENST00000513578 IGHV3OR16-13A0A075B7E8 117 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 IGHV3-49A0A0A0MS15 119 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 IGHV3-74A0A0B4J1X5 117 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 A0A1B0GW15 77 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 TMEM213A2RRL7 107 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 FAM181BA6NEQ2 426 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 HIGD1CA8MV81 97 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 ZNF705FA8MVS1 300 aaPredicted RBP6.35□□□□□ -1.39
RNF4-220ENST00000513578 KLF5Q13887 457 aaPredicted RBP6.35□□□□□ -1.39
RNF4-220ENST00000513578 SMUG1Q53HV7 270 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 TM4SF20Q53R12 229 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 FAM162BQ5T6X4 162 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 OR2D3Q8NGH3 330 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 C4orf3Q8WVX3 66 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 GTSF1Q8WW33 167 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 C16orf92Q96LL3 132 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 LINC00477Q96M19 166 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 VGLL1Q99990 258 aa6.35□□□□□ -1.39
RNF4-220ENST00000513578 MRPL18Q9H0U6 180 aaKnown RBP6.35□□□□□ -1.39
RNF4-220ENST00000513578 FLNAP21333 2647 aaKnown RBP6.35□□□□□ -1.39
RNF4-220ENST00000513578 ANK3Q12955 4377 aaKnown RBP6.35□□□□□ -1.39
RNF4-220ENST00000513578 IGHV4OR15-8A0A075B7B6 117 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 A0A087WW49 117 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 XKRY2A2RUG3 117 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 FABP5P3A8MUU1 101 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 PRAC2D3DTV9 90 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 SH2D1AO60880 128 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 CA1P00915 261 aaPredicted RBP6.34□□□□□ -1.39
RNF4-220ENST00000513578 CBLN1P23435 193 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 ZNF138P52744 262 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 TCL1AP56279 114 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 HILS1P60008 231 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 Q0VG73 95 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 TMEM78Q5T7P6 136 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 IGFL4Q6B9Z1 124 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 HIST3H2BBQ8N257 126 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 ZNF418Q8TF45 676 aaPredicted RBP6.34□□□□□ -1.39
RNF4-220ENST00000513578 C8orf49Q96NF6 230 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 ASCL2Q99929 193 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 AGPAT4-IT1Q9H0P7 198 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 ESM1Q9NQ30 184 aa6.34□□□□□ -1.39
RNF4-220ENST00000513578 MXRA5Q9NR99 2828 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 TRAV2A0A0B4J234 112 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 TMEM189A5PLL7 270 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 LINC01619G3V211 115 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 NDUFA7O95182 113 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 FRMD6-AS1P0C7T7 363 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 ESDP10768 282 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 FOSL1P15407 271 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 HOXD3P31249 432 aaPredicted RBP6.33□□□□□ -1.4
RNF4-220ENST00000513578 ID1P41134 155 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 HIST1H1AQ02539 215 aaPredicted RBP6.33□□□□□ -1.4
RNF4-220ENST00000513578 TCTEX1D4Q5JR98 221 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 MRPL54Q6P161 138 aaKnown RBP6.33□□□□□ -1.4
RNF4-220ENST00000513578 Q71RC1 249 aaPredicted RBP6.33□□□□□ -1.4
RNF4-220ENST00000513578 TCF24Q7RTU0 167 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 LINC00518Q8N0U6 118 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 RNF182Q8N6D2 247 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 DCANP1Q8TF63 244 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 C20orf173Q96LM9 149 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 JMJD8Q96S16 334 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 CSMD2Q7Z408 3487 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 CCDC168Q8NDH2 2452 aa6.33□□□□□ -1.4
RNF4-220ENST00000513578 C2orf70A6NJV1 201 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 IGLC6P0CF74 106 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 SRD5A1P18405 259 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 ZNF80P51504 273 aaPredicted RBP6.32□□□□□ -1.4
RNF4-220ENST00000513578 HBBP68871 147 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 RIGQ13278 110 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 LINC01559Q495D7 138 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 OR10J3Q5JRS4 329 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 DUX5Q96PT3 197 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 GPR61Q9BZJ8 451 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 PEMTQ9UBM1 199 aa6.32□□□□□ -1.4
RNF4-220ENST00000513578 A0A1B0GUT8 65 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 IFITM10A6NMD0 228 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 K7EQG2 157 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 M0QZ24 198 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 SPINK4O60575 86 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 LY6G6DO95868 133 aa6.31□□□□□ -1.4
RNF4-220ENST00000513578 APCSP02743 223 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms