RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 GRIN2AQ12879 1464 aa0.85□□□□□ -2.27
RNF4-219ENST00000513450 MYH9P35579 1960 aaKnown RBP0.85□□□□□ -2.27
RNF4-219ENST00000513450 EML5Q05BV3 1969 aa0.85□□□□□ -2.27
RNF4-219ENST00000513450 PIK3C2AO00443 1686 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 ADAMTS7Q9UKP4 1686 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 MGAMO43451 1857 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 TRPM7Q96QT4 1865 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 PLXNA4Q9HCM2 1894 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 COL4A2P08572 1712 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 A0A0G2JMM0 328 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 A0A0G2JQZ4 141 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 A0A1W2PPB8 328 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 OR2T8A6NH00 312 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 ZNF705FA8MVS1 300 aaPredicted RBP0.84□□□□□ -2.27
RNF4-219ENST00000513450 KIR3DP1A8MWS1 328 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 C5orf67F2Z3F1 127 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 SDCBPO00560 298 aaPredicted RBP0.84□□□□□ -2.27
RNF4-219ENST00000513450 NCR2O95944 276 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 CD2P06729 351 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 METTL15P1P0C7V9 234 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 SMIM6P0DI80 62 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 FABP4P15090 132 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 FGF7P21781 194 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 NFYAP23511 347 aaPredicted RBP0.84□□□□□ -2.27
RNF4-219ENST00000513450 PEBP1P30086 187 aaKnown RBP0.84□□□□□ -2.27
RNF4-219ENST00000513450 SSR2P43308 183 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 PLGLB1Q02325 96 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 ZNF846Q147U1 533 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 PABPC1L2AQ5JQF8 200 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 MIC13Q5XKP0 118 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 IZUMO2Q6UXV1 221 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 ZNF826PQ6ZT77 177 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 C3orf62Q6ZUJ4 267 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 LINC00269Q8N2A0 174 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 MMGT1Q8N4V1 131 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 LINC00471Q8N535 108 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 TCTEX1D1Q8N7M0 179 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 OR10AC1Q8NH08 325 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 SPACA4Q8TDM5 124 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 MAGOHBQ96A72 148 aaKnown RBP0.84□□□□□ -2.27
RNF4-219ENST00000513450 SLC50A1Q9BRV3 221 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 SLC35B3Q9H1N7 401 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 HEATR1Q9H583 2144 aaKnown RBP0.84□□□□□ -2.27
RNF4-219ENST00000513450 BOKQ9UMX3 212 aaPredicted RBP0.84□□□□□ -2.27
RNF4-219ENST00000513450 LHFPL6Q9Y693 200 aa0.84□□□□□ -2.27
RNF4-219ENST00000513450 BCL9LQ86UU0 1499 aa0.84□□□□□ -2.28
RNF4-219ENST00000513450 BAZ2BQ9UIF8 2168 aaKnown RBP0.84□□□□□ -2.28
RNF4-219ENST00000513450 NISCHQ9Y2I1 1504 aa0.84□□□□□ -2.28
RNF4-219ENST00000513450 TMEM2Q9UHN6 1383 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 RIC1Q4ADV7 1423 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 C20orf202A1L168 122 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 FAM92AA1XBS5 289 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 HMSDA8MTL9 139 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 PMP2P02689 132 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 CRPP02741 224 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 IFNA4P05014 189 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 APODP05090 189 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 TPT1P13693 172 aaKnown RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 HIST1H1DP16402 221 aaKnown RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 PCBD1P61457 104 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 MRPS36P82909 103 aaKnown RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 MYL5Q02045 173 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 ZNF90Q03938 601 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 OR4B1Q8NGF8 309 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 OR4X2Q8NGF9 303 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 OR8B3Q8NGG8 313 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 OR2T35Q8NGX2 323 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 OTOSQ8NHW6 89 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 Q8TAT8 98 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 PP6455Q8WZ26 134 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 LSM10Q969L4 123 aaKnown RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 RAB37Q96AX2 223 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 HYLS1Q96M11 299 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 CIB3Q96Q77 187 aaPredicted RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 TCEAL7Q9BRU2 100 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 SEC11CQ9BY50 192 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 TMEM191AQ9H0A3 160 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 TAS2R4Q9NYW5 299 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 RPL26L1Q9UNX3 145 aaKnown RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 SOX21Q9Y651 276 aaPredicted RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 CHCHD2Q9Y6H1 151 aaPredicted RBP0.83□□□□□ -2.28
RNF4-219ENST00000513450 NCAPD3P42695 1498 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 MRC2Q9UBG0 1479 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 FREM3P0C091 2139 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 MED12LQ86YW9 2145 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 AKAP11Q9UKA4 1901 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 ADGRB1O14514 1584 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 GLI3P10071 1580 aa0.83□□□□□ -2.28
RNF4-219ENST00000513450 NINQ8N4C6 2090 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 RTEL1-TNFRSF6BF6WH68 1400 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 KDM6AO15550 1401 aaPredicted RBP0.82□□□□□ -2.28
RNF4-219ENST00000513450 MYOM3Q5VTT5 1437 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 KIAA1107Q9UPP5 1409 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 COL4A5P29400 1685 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 QRICH2Q9H0J4 1663 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 FREM1Q5H8C1 2179 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 DOCK10Q96BY6 2186 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 COL24A1Q17RW2 1714 aa0.82□□□□□ -2.28
RNF4-219ENST00000513450 TRBV20-1A0A075B6N2 111 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms