RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SH2D6Q7Z4S9 175 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 NDUFA4L2Q9NRX3 87 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 NDUFS7O75251 213 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 PRR30Q53SZ7 412 aaPredicted RBP9.03□□□□□ -0.96
TCOF1-211ENST00000513346 WDR86Q86TI4 376 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 NUP37Q8NFH4 326 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 C2orf16Q68DN1 1984 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 C19orf54Q5BKX5 351 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 DKK2Q9UBU2 259 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 C2orf70A6NJV1 201 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 Q8TAT8 98 aa9.03□□□□□ -0.96
TCOF1-211ENST00000513346 PRB1P04280 392 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 ZC2HC1AQ96GY0 325 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 GAGE12JA6NER3 117 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 GAGE7O76087 117 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 GAGE12FP0CL80 117 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 GAGE12GP0CL81 117 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 GAGE12IP0CL82 117 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 GAGE4Q13068 117 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 TMEM200BQ69YZ2 307 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 RNF182Q8N6D2 247 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 MYMXA0A1B0GTQ4 84 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 IGHV1-8P0DP01 117 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 PAX1P15863 534 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 Q8N8P6 123 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 SHANK2-AS3Q9BTD1 123 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 C1QTNF4Q9BXJ3 329 aa9.02□□□□□ -0.97
TCOF1-211ENST00000513346 B5MCH6 92 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 IFITM1P13164 125 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 C1orf122Q6ZSJ8 110 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 MALRD1Q5VYJ5 2156 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 A0A1W2PRX2 142 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 PDE6HQ13956 83 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 SP5Q6BEB4 398 aaPredicted RBP9.01□□□□□ -0.97
TCOF1-211ENST00000513346 FOXI2Q6ZQN5 318 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 IGF2BP2-AS1Q96M15 143 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 SS18L2Q9UHA2 77 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 TP53TG3Q9ULZ0 132 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 C15orf65H3BRN8 121 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 M0R2P5 195 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 CEACAM4O75871 244 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 LTAP01374 205 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 A0A1W2PPI3 338 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 IGLL5B9A064 214 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 NPYP01303 97 aa9.01□□□□□ -0.97
TCOF1-211ENST00000513346 MRPL35Q9NZE8 188 aaKnown RBP9.01□□□□□ -0.97
TCOF1-211ENST00000513346 ZNF106Q9H2Y7 1883 aaKnown RBP9.01□□□□□ -0.97
TCOF1-211ENST00000513346 FREM1Q5H8C1 2179 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 SUMO2P61956 95 aaKnown RBP9□□□□□ -0.97
TCOF1-211ENST00000513346 WFDC2Q14508 124 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 TRAV26-1A0A087WT03 109 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 LY6HO94772 140 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 RNASE4P34096 147 aaKnown RBP9□□□□□ -0.97
TCOF1-211ENST00000513346 MED13Q9UHV7 2174 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 TRBV19A0A075B6N1 114 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 ITLN2Q8WWU7 325 aaPredicted RBP9□□□□□ -0.97
TCOF1-211ENST00000513346 FGF23Q9GZV9 251 aaPredicted RBP9□□□□□ -0.97
TCOF1-211ENST00000513346 B4DSR2 109 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 POU2AF1Q16633 256 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 PLEKHB2Q96CS7 222 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 LINC00527Q9UJ94 153 aa9□□□□□ -0.97
TCOF1-211ENST00000513346 LRRK2Q5S007 2527 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 BOD1L2Q8IYS8 172 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 CITED1Q99966 193 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 UBE2L6O14933 153 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 SLC25A16P16260 332 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 KLRD1Q13241 179 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 ZNF295-AS1Q8N0V1 137 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 C8orf49Q96NF6 230 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 SIGLEC9Q9Y336 463 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 TNFRSF18Q9Y5U5 241 aa8.99□□□□□ -0.97
TCOF1-211ENST00000513346 LTBP2Q14767 1821 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 ZNF503-AS2A6NEH8 195 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 ZNF134P52741 427 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 CRYBA4P53673 196 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 VMO1Q7Z5L0 202 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 TMEM101Q96IK0 257 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 GAFA1Q96PS6 74 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 DPH3P1Q9H4G8 78 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 TMEM14CQ9P0S9 112 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 E7EQL1 145 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 SPATA12Q7Z6I5 190 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 YLPM1P49750 1951 aaKnown RBP8.98□□□□□ -0.97
TCOF1-211ENST00000513346 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 COL8A2P25067 703 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 FAM120AOSQ5T036 256 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 THAP8Q8NA92 274 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 OR11H6Q8NGC7 330 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 POLQO75417 2590 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 PEMTQ9UBM1 199 aa8.98□□□□□ -0.97
TCOF1-211ENST00000513346 IGHV1-3A0A0C4DH29 117 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 F8VRH5 84 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 NPFFO15130 113 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 FXYD2P54710 66 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 WT1-ASQ06250 92 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms