RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CCDC94Q9BW85 323 aaPredicted RBP-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 TMEM126AQ9H061 195 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 LPAR5Q9H1C0 372 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 LINC00846Q9NV44 126 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 UQCC1Q9NVA1 299 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 TVP23BQ9NYZ1 205 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 ARL5AQ9Y689 179 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 BRCA2P51587 3418 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 AKAP6Q13023 2319 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 ACACAQ13085 2346 aa-0.29□□□□□ -2.46
PDGFC-208ENST00000512711 SPTBN1Q01082 2364 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 FMN1Q68DA7 1419 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 VPS13AQ96RL7 3174 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 SPAG17Q6Q759 2223 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 CEP250Q9BV73 2442 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 GOLGB1Q14789 3259 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 hADV38S2A0JD32 116 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 C9orf170A2RU37 121 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 SULT1C4O75897 302 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 OR7C1O76099 320 aaPredicted RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 CNIH1O95406 144 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 TTRP02766 147 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 C8GP07360 202 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 SERPINB9P50453 376 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 RAB5CP51148 216 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 VBP1P61758 197 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 RPL37P61927 97 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 RANP62826 216 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 OR2F1Q13607 317 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 ZNF56Q15929 161 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 GLYATL3Q5SZD4 288 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 CCDC122Q5T0U0 273 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 C22orf39Q6P5X5 142 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 Q6Q795 121 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 TMEM14EPQ6UXP3 125 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 PATE2Q6UY27 113 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 VMO1Q7Z5L0 202 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 ARPINQ7Z6K5 226 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 KRTAP8-1Q8IUC2 63 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 OR6V1Q8N148 313 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 C12orf45Q8N5I9 185 aaPredicted RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 OR5D16Q8NGK9 328 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 CHCHD1Q96BP2 118 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 MALSU1Q96EH3 234 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 YPEL2Q96QA6 119 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 NPCDR1Q9BY65 106 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 RNASE7Q9H1E1 156 aaKnown RBP-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 TMEM133Q9H2Q1 129 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 VPS29Q9UBQ0 182 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 GUCA1BQ9UMX6 200 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 NEO1Q92859 1461 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 DNAJC13O75165 2243 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 ERBINQ96RT1 1412 aa-0.3□□□□□ -2.46
PDGFC-208ENST00000512711 XIRP2A4UGR9 3374 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 DOPEY2Q9Y3R5 2298 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 CENPFP49454 3210 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 A0A087WSZ3 146 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 TRAV27A0A087WT01 109 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 A0A1W2PRS3 328 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 FAM159BA6NKW6 160 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 KPNA3O00505 521 aaPredicted RBP-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 SMR3BP02814 79 aaPredicted RBP-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 MT1HL1P0DM35 61 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 PIGPP57054 158 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 UBE2BP63146 152 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 RRN3P1Q2M238 152 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 LINC00299Q6ZSB3 139 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 C10orf111Q8N326 155 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 LRRC18Q8N456 261 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 C5orf17Q8NAS9 161 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 BORCS7Q96B45 105 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 HYLS1Q96M11 299 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 ZNF714Q96N38 554 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 POPDC3Q9HBV1 291 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 GLTPQ9NZD2 209 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 NOSIPQ9Y314 301 aaKnown RBP-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 MYLKQ15746 1914 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 NCOA1Q15788 1441 aa-0.31□□□□□ -2.46
PDGFC-208ENST00000512711 RFX7Q2KHR2 1363 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 PKDREJQ9NTG1 2253 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 DUXBA0A1W2PPF3 345 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 hDV103S1A0JD37 113 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 CLDN24A6NM45 220 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 TMEM256-PLSCR3K7ERE1 68 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 TAX1BP3O14907 124 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 PDE6DO43924 150 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 HAND1O96004 215 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 IFNA5P01569 189 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 IGLV1-51P01701 117 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 IFNA16P05015 189 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 TPM3P06753 285 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 MT1GP13640 62 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 HLA-EP13747 358 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 PDE6GP18545 87 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 RPS3P23396 243 aaKnown RBP eCLIP-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 ERP29P30040 261 aaKnown RBP-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 DEFA5Q01523 94 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 AESQ08117 197 aa-0.32□□□□□ -2.46
PDGFC-208ENST00000512711 MIR22HGQ0VDD5 57 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms