RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 TMEM183AQ8IXX5 376 aa6.87□□□□□ -1.31
NR1I3-228ENST00000511676 C15orf54Q8N8G6 183 aa6.87□□□□□ -1.31
NR1I3-228ENST00000511676 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
NR1I3-228ENST00000511676 SFRP2Q96HF1 295 aa6.87□□□□□ -1.31
NR1I3-228ENST00000511676 C16orf92Q96LL3 132 aa6.87□□□□□ -1.31
NR1I3-228ENST00000511676 OSTCQ9NRP0 149 aa6.87□□□□□ -1.31
NR1I3-228ENST00000511676 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
NR1I3-228ENST00000511676 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 H3BTX0 84 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 H7BYZ3 331 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 DNASE2O00115 360 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-228ENST00000511676 IGLV2-11P01706 119 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 IGLV2-8P01709 118 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 SLURP1P55000 103 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 SNRPD3P62318 126 aaKnown RBP6.86□□□□□ -1.31
NR1I3-228ENST00000511676 GNG5P63218 68 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 DCANP1Q8TF63 244 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 NDFIP1Q9BT67 221 aa6.86□□□□□ -1.31
NR1I3-228ENST00000511676 AURKAIP1Q9NWT8 199 aaPredicted RBP6.86□□□□□ -1.31
NR1I3-228ENST00000511676 TRAV8-2A0A0B4J237 113 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 IGHV3-66A0A0C4DH42 116 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 K7EN84 100 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 K7EQG2 157 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 M0R3E3 92 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 CSN3P07498 182 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 S100PP25815 95 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 DEFB136Q30KP8 78 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 RNF212Q495C1 297 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 C11orf44Q8N8P7 122 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 OR4B1Q8NGF8 309 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 DLX4Q92988 240 aaPredicted RBP6.85□□□□□ -1.31
NR1I3-228ENST00000511676 LINC00477Q96M19 166 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 ODF3Q96PU9 254 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 SPAG8Q99932 426 aaPredicted RBP6.85□□□□□ -1.31
NR1I3-228ENST00000511676 PSG8Q9UQ74 426 aa6.85□□□□□ -1.31
NR1I3-228ENST00000511676 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 IGHV3-49A0A0A0MS15 119 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 FAM231BA6NCW3 169 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 OR4C46A6NHA9 309 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 ZNF138P52744 262 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 CMC4P56277 68 aaPredicted RBP6.84□□□□□ -1.31
NR1I3-228ENST00000511676 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.31
NR1I3-228ENST00000511676 IBA57Q5T440 356 aaKnown RBP6.84□□□□□ -1.31
NR1I3-228ENST00000511676 TMEM78Q5T7P6 136 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 KCNIP4Q6PIL6 250 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 ZNF738Q8NE65 137 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 OR10J6PQ8NGY7 276 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 YPEL4Q96NS1 127 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 B9D2Q9BPU9 175 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 MS4A6AQ9H2W1 248 aa6.84□□□□□ -1.31
NR1I3-228ENST00000511676 TRAV34A0A0B4J273 112 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 C19orf71A6NCJ1 209 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 C3orf84H3BNL1 204 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 SCO1O75880 301 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
NR1I3-228ENST00000511676 INSL3P51460 131 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 RPL11P62913 178 aaKnown RBP6.83□□□□□ -1.32
NR1I3-228ENST00000511676 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 ADAMTSL5Q6ZMM2 481 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 RBPMS2Q6ZRY4 209 aaKnown RBP6.83□□□□□ -1.32
NR1I3-228ENST00000511676 CBLN2Q8IUK8 224 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 DYNLRB2Q8TF09 96 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 LINC00479Q96M42 142 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 CLUHP3Q96NS8 147 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 PRR25Q96S07 402 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 PYGO2Q9BRQ0 406 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 GFRA4Q9GZZ7 299 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 SAV1Q9H4B6 383 aaPredicted RBP6.83□□□□□ -1.32
NR1I3-228ENST00000511676 RPH3ALQ9UNE2 315 aa6.83□□□□□ -1.32
NR1I3-228ENST00000511676 A0A1W2PRX2 142 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 PGPEP1LA6NFU8 196 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 A8MTW9 85 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 PFN1P07737 140 aaKnown RBP6.82□□□□□ -1.32
NR1I3-228ENST00000511676 MGST1P10620 155 aaKnown RBP6.82□□□□□ -1.32
NR1I3-228ENST00000511676 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 EGFEM1PQ0D2K5 195 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 SMUG1Q53HV7 270 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 Q6AWC8 147 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 TMEM88Q6PEY1 159 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 PRNTQ86SH4 94 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 APRG1Q8IVJ8 170 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 GBGT1Q8N5D6 347 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 RNF182Q8N6D2 247 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 OR8A1Q8NGG7 326 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 DAZAP1Q96EP5 407 aaKnown RBP6.82□□□□□ -1.32
NR1I3-228ENST00000511676 IL36BQ9NZH7 164 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 V9GYV3 84 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 NOTCH3Q9UM47 2321 aa6.82□□□□□ -1.32
NR1I3-228ENST00000511676 IGKV2-40A0A087WW87 121 aaPredicted RBP6.81□□□□□ -1.32
NR1I3-228ENST00000511676 TRAV8-1A0A0A6YYK1 113 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms