RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 HDHD3Q9BSH5 251 aaPredicted RBP7.45□□□□□ -1.22
USP53-207ENST00000510852 MRPL18Q9H0U6 180 aaKnown RBP7.45□□□□□ -1.22
USP53-207ENST00000510852 RPS10P5Q9NQ39 176 aa7.45□□□□□ -1.22
USP53-207ENST00000510852 C15orf62A8K5M9 175 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 DEDDO75618 318 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 FSTL3O95633 263 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 INSL3P51460 131 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 ZNF525Q8N782 197 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 ZNRF1Q8ND25 227 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 C18orf15Q96N68 181 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 TANC2Q9HCD6 1990 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 ABCA12Q86UK0 2595 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 IGHV2-26A0A0B4J1V2 119 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 H0YIZ8 118 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 CD5LO43866 347 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 SLC25A6P12236 298 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 VDAC2P45880 294 aaPredicted RBP7.44□□□□□ -1.22
USP53-207ENST00000510852 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
USP53-207ENST00000510852 AADACL3Q5VUY0 350 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 LYPD2Q6UXB3 125 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 FAM216BQ8N7L0 139 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 VSIG4Q9Y279 399 aa7.44□□□□□ -1.22
USP53-207ENST00000510852 APCP25054 2843 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 ZNF705FA8MVS1 300 aaPredicted RBP7.43□□□□□ -1.22
USP53-207ENST00000510852 K7N7A8 449 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 ZNF705DP0CH99 300 aaPredicted RBP7.43□□□□□ -1.22
USP53-207ENST00000510852 ZNF705BP0CI00 300 aaPredicted RBP7.43□□□□□ -1.22
USP53-207ENST00000510852 YPEL3P61236 119 aaPredicted RBP7.43□□□□□ -1.22
USP53-207ENST00000510852 IL1F10Q8WWZ1 152 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 LAMTOR3Q9UHA4 124 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 POLQO75417 2590 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 ISLRO14498 428 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 ZNF497Q6ZNH5 498 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 C10orf126Q8N4M7 172 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 CSMD1Q96PZ7 3565 aa7.43□□□□□ -1.22
USP53-207ENST00000510852 SFT2D2O95562 160 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 NAPSAO96009 420 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 FCGR3AP08637 254 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 PSMB8P28062 276 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 TMEM155Q4W5P6 130 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 Q6ZPA2 131 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
USP53-207ENST00000510852 MRPL30Q8TCC3 161 aaKnown RBP7.42□□□□□ -1.22
USP53-207ENST00000510852 KAAG1Q9UBP8 84 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 CTSZQ9UBR2 303 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 CACNG5Q9UF02 275 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 HECTD1Q9ULT8 2610 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 ASH1LQ9NR48 2969 aaKnown RBP7.42□□□□□ -1.22
USP53-207ENST00000510852 TRBV19A0A075B6N1 114 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 TMEM30CPA0ZSE6 113 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 OOSP1A8MZH6 123 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 MGST3O14880 152 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 TRGC1P0CF51 173 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 INPP1P49441 399 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 SSBP1Q04837 148 aaKnown RBP7.42□□□□□ -1.22
USP53-207ENST00000510852 C9orf153Q5TBE3 101 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 LINC00311Q8N616 119 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 RITA1Q96K30 269 aa7.42□□□□□ -1.22
USP53-207ENST00000510852 UNC79Q9P2D8 2635 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 TRBV6-6A0A0A6YYG2 114 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 NDUFB3O43676 98 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 SEC11BP0C7V7 166 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 TMEM258P61165 79 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 Q0VG73 95 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 KLF9Q13886 244 aaPredicted RBP7.41□□□□□ -1.22
USP53-207ENST00000510852 DEFB113Q30KQ7 82 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 TOMM5Q8N4H5 51 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 TMEM75Q8N9X5 138 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 FAM168AQ92567 244 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 BPESC1Q9GZL8 116 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 C11orf68Q9H3H3 251 aaKnown RBP7.41□□□□□ -1.22
USP53-207ENST00000510852 RNF114Q9Y508 228 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 ARID1AO14497 2285 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 NAV2Q8IVL1 2488 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 NDUFS5O43920 106 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 IGLC2P0DOY2 106 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 IGLC3P0DOY3 106 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 EDDM3BP56851 147 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 FOXI1Q12951 378 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 ZNF880Q6PDB4 577 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 FAM19A3Q7Z5A8 133 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 ZNF114Q8NC26 417 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 WFDC11Q8NEX6 87 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 OR4X2Q8NGF9 303 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 OR10J6PQ8NGY7 276 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 C10orf105Q8TEF2 133 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 PAXXQ9BUH6 204 aa7.41□□□□□ -1.22
USP53-207ENST00000510852 C7orf77A4D0Y5 90 aa7.4□□□□□ -1.22
USP53-207ENST00000510852 ZNF727A8MUV8 499 aa7.4□□□□□ -1.22
USP53-207ENST00000510852 CD3DP04234 171 aa7.4□□□□□ -1.22
USP53-207ENST00000510852 AKAP9Q99996 3911 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 hDV102S1A0JD36 115 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 ZNF736B4DX44 427 aaPredicted RBP7.4□□□□□ -1.23
USP53-207ENST00000510852 PLA2G10O15496 165 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 HYPMO75409 117 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 TAS2R19P59542 299 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 ZNF90Q03938 601 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 OR8B3Q8NGG8 313 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms