RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 MFAP2P55001 183 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 PDE6HQ13956 83 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 FXYD3Q14802 87 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 ACTL10Q5JWF8 245 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 PATE2Q6UY27 113 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 LINC00305Q7Z4B0 112 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 ZFP82Q8N141 532 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 C5orf17Q8NAS9 161 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 RASL11BQ9BPW5 248 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 MRPL27Q9P0M9 148 aaKnown RBP5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 HIGD1AQ9Y241 93 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 WNK2Q9Y3S1 2297 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 DCHS1Q96JQ0 3298 aa5.08□□□□□ -1.6
TRAPPC11-206ENST00000509857 NCOR2Q9Y618 2525 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 IGLV11-55A0A075B6I3 123 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 TEX48A0A1B0GUV7 120 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 FAM231BA6NCW3 169 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 PEX7O00628 323 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 EIF3GO75821 320 aaKnown RBP eCLIP5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 BRI3O95415 125 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 NBEAP1P0C6P0 100 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 TRGC1P0CF51 173 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 HIST1H1EP10412 219 aaKnown RBP5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 S100A2P29034 98 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 TMEM183BQ1AE95 376 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 CENPWQ5EE01 88 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 LDLRAD2Q5SZI1 272 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 CYB5R2Q6BCY4 276 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 TMEM183AQ8IXX5 376 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 SGMS2Q8NHU3 365 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 VN1R17PQ8TDU5 208 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 ARPC1AQ92747 370 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 FXYD5Q96DB9 178 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 FMC1Q96HJ9 113 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 IGF2BP2-AS1Q96M15 143 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 PACRGQ96M98 296 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 C12orf57Q99622 126 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 OTORQ9NRC9 128 aa5.07□□□□□ -1.6
TRAPPC11-206ENST00000509857 ASPMQ8IZT6 3477 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 ADGRG4Q8IZF6 3080 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 WI2-2373I1.2A0A1W2PRP0 233 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 H3BRN7 92 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 ZNF253O75346 499 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 IGKV1-17P01599 117 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 KRTAP1-4P0C5Y4 121 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 RD3LP0DJH9 198 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 CNTFRP26992 372 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 CRYBB3P26998 211 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 ZNF90Q03938 601 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 RPEL1Q2QD12 228 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 BPIFA4PQ86YQ2 179 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 HIST3H2BBQ8N257 126 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 FRZBQ92765 325 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 TBX15Q96SF7 602 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 SHANK2-AS3Q9BTD1 123 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 DERL1Q9BUN8 251 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 GNB1LQ9BYB4 327 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 MRPL36Q9P0J6 103 aaKnown RBP5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 EPDR1Q9UM22 224 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 SOX21Q9Y651 276 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 V9GYV3 84 aa5.06□□□□□ -1.6
TRAPPC11-206ENST00000509857 A0A1W2PRD5 423 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 A0A1W2PRF3 423 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 A0A1W2PRM7 423 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 SMIM27A0A1W2PRY6 76 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 H3BUA1 57 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 K7EN84 100 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 M0QZK8 103 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 FCN1O00602 326 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 IGLV2-8P01709 118 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 HLA-DQA1P01909 254 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 REG1AP05451 166 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 ID1P41134 155 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 NDUFA6P56556 154 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 HES1Q14469 280 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 LINC00242Q5T6M2 205 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 ATP5L2Q7Z4Y8 100 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 LHFPL4Q7Z7J7 247 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 STHQ8IWL8 128 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 Q8N9W7 124 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 OR4F17Q8NGA8 305 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 OR4B1Q8NGF8 309 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 FAM122AQ96E09 287 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 GPR82Q96P67 336 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 SLC25A39Q9BZJ4 359 aaPredicted RBP5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 BPESC1Q9GZL8 116 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 ZNF492Q9P255 531 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 HILPDAQ9Y5L2 63 aa5.05□□□□□ -1.6
TRAPPC11-206ENST00000509857 ARHGAP32A7KAX9 2087 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 IGHV7-81A0A0B4J1V7 117 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 K7EQM0 130 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 NPFFO15130 113 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 GNG7O60262 68 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 LY6HO94772 140 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 SLC25A5P05141 298 aaKnown RBP5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 ESDP10768 282 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 SLC25A16P16260 332 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 ORM2P19652 201 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 UQCRFS1P47985 274 aa5.04□□□□□ -1.6
TRAPPC11-206ENST00000509857 UBE2G1P62253 170 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms