RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 FOXE3Q13461 319 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 GTF2H5Q6ZYL4 71 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 ZFHX4Q86UP3 3567 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 CLPSL1A2RUU4 121 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 K7EP34 96 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 NHLH1Q02575 133 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 C9orf47Q6ZRZ4 202 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 DYNAPQ8N1N2 210 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 OR8A1Q8NGG7 326 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 LINC01560Q8TB33 94 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 MCRIP2Q9BUT9 160 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 HILPDAQ9Y5L2 63 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 CACNA1HO95180 2353 aa7.13□□□□□ -1.27
PDGFRA-208ENST00000509490 A0A1W2PRD5 423 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 A0A1W2PRF3 423 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 A0A1W2PRM7 423 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 TWIST1Q15672 202 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 C19orf54Q5BKX5 351 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 LOC400499M0QZD8 3231 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 CENPVL3A0A0U1RRI6 287 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 GAGE12BA1L429 117 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 K7EMI3 77 aa7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 PRB3Q04118 309 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-208ENST00000509490 K7ERU9 68 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 TNFRSF6BO95407 300 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 UBE2E1P51965 193 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 KLRD1Q13241 179 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 TAL2Q16559 108 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 TRBV7-1A0A0A6YYK4 115 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 NEGR1Q7Z3B1 354 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 TM2D2Q9BX73 214 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 TRAV8-2A0A0B4J237 113 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 LOC389332A0A1B0GUA5 103 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 MED14OSP0DP75 135 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 NRACQ8N912 160 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 BSNQ9UPA5 3926 aa7.11□□□□□ -1.27
PDGFRA-208ENST00000509490 PRRC2CQ9Y520 2896 aaKnown RBP7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 TRAV12-1A0A0B4J245 112 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 IGHV7-4-1A0A0J9YVY3 117 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 GAGE10A6NGK3 116 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 HES1Q14469 280 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 PRSS57Q6UWY2 283 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 JMJD8Q96S16 334 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 TRBV7-9A0A0J9YWB2 115 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 SMIM17P0DL12 118 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 ADORA2A-AS1P86434 159 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 Q8TAT8 98 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 MRAP2Q96G30 205 aa7.1□□□□□ -1.27
PDGFRA-208ENST00000509490 TMSB15BA0A087X1C1 80 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 SLC25A16P16260 332 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 APRG1Q8IVJ8 170 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 POM121L12Q8N7R1 296 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 OR2K2Q8NGT1 345 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 ITLN2Q8WWU7 325 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 A0A0G2JLM5 398 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 A0A1W2PPM0 123 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 H0Y8G0 127 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 LEPP41159 167 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 SMIM15Q7Z3B0 74 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 PHLDA1Q8WV24 401 aaPredicted RBP7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 EEF1AKMT3Q96AZ1 226 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 AGPAT4-IT1Q9H0P7 198 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 DKK2Q9UBU2 259 aa7.09□□□□□ -1.27
PDGFRA-208ENST00000509490 PRAC2D3DTV9 90 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 SMKR1H3BMG3 65 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 DPM2O94777 84 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 IGKCP01834 107 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 C15orf32Q32M92 178 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 NCBP2LA6PVI3 153 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 ORM1P02763 201 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 ZFP36P26651 326 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 HLA-DMBP28068 263 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 GRNP28799 593 aaKnown RBP7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 MSRB1Q9NZV6 116 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 C11orf21Q9P2W6 132 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 S4R3C0 116 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 M0R381 172 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 FAM19A4Q96LR4 140 aa7.08□□□□□ -1.28
PDGFRA-208ENST00000509490 FAM223BA6NKX1 122 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 FAM90A27PA6NNH2 459 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 G3V4G9 280 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 UCNP55089 124 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 RPL32P62910 135 aaKnown RBP7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 C9orf139Q6ZV77 190 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 FAM223AQ8IWN6 122 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 ZNF292O60281 2723 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 A0A087WX48 190 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 A0A1B0GWB2 263 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 LAGE3Q14657 143 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 GLMPQ8WWB7 406 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 AP1S3Q96PC3 154 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 C20orf78Q9BR46 151 aa7.07□□□□□ -1.28
PDGFRA-208ENST00000509490 H3BUA1 57 aa7.06□□□□□ -1.28
PDGFRA-208ENST00000509490 CCL21O00585 134 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms