RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TIRAPP58753 221 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 NANOS2P60321 138 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 PSG3Q16557 428 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 SPINK13Q1W4C9 94 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 FFAR4Q5NUL3 377 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 LCN15Q6UWW0 184 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 Q6ZNX1 250 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF767PQ75MW2 155 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 EXOC3-AS1Q8N2X6 119 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 HSD17B11Q8NBQ5 300 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 SYT8Q8NBV8 401 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF738Q8NE65 137 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 OR1L4Q8NGR5 311 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 GATAD1Q8WUU5 269 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 RPUSD4Q96CM3 377 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 ST6GAL2Q96JF0 529 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 FAM19A4Q96LR4 140 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 PKD1P98161 4303 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 A0A1B0GVG6 124 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 BOLA2-SMG1P6H3BVE0 249 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 HMGB3O15347 200 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 ZNF253O75346 499 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 OR10J4P0C629 311 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 HIST1H1EP10412 219 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 PSG9Q00887 426 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 HIST1H1AQ02539 215 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 ERCC8Q13216 396 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 BPIFA4PQ86YQ2 179 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 RPP25LQ8N5L8 163 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 OR4B1Q8NGF8 309 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 OR2G3Q8NGZ4 309 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 PFDN5Q99471 154 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 RARRES2Q99969 163 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 SLC50A1Q9BRV3 221 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 MRPL32Q9BYC8 188 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 RPRMQ9NS64 109 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 TIMM9Q9Y5J7 89 aa5.15□□□□□ -1.59
TOPBP1-207ENST00000509162 ARPC5O15511 151 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 CT45A10P0DMU9 189 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 AZU1P20160 251 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 ID1P41134 155 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 GFI1BQ5VTD9 330 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 FAM122CQ6P4D5 195 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 Q6ZRG5 221 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 Q6ZTC4 211 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 Q8TAT8 98 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 BLNKQ8WV28 456 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 ASB13Q8WXK3 278 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 IGF2BP2-AS1Q96M15 143 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 RYR1P21817 5038 aa5.14□□□□□ -1.59
TOPBP1-207ENST00000509162 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 LCE6AA0A183 80 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 GGTLC3B5MD39 225 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 ARL14EPLP0DKL9 152 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 M6PRP20645 277 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 FAM3BP58499 235 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 GNG5P63218 68 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 UBE2L3P68036 154 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 BTN1A1Q13410 526 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 RAB31Q13636 194 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 ICAM4Q14773 271 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 C12orf74Q32Q52 190 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 SAMD13Q5VXD3 122 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 ZFAND2AQ8N6M9 145 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 SUN5Q8TC36 379 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 MRPL53Q96EL3 112 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 VGLL1Q99990 258 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 PSMG3Q9BT73 122 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 PAXXQ9BUH6 204 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 OR51M1Q9H341 326 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 KCNIP2Q9NS61 270 aa5.13□□□□□ -1.59
TOPBP1-207ENST00000509162 KIAA1109Q2LD37 5005 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 IGHV3OR16-12A0A075B7B8 117 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 ZNF705GA8MUZ8 300 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 KLLNB2CW77 178 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 OR7C2O60412 319 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 IFNA5P01569 189 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 STAG3L2P0CL84 134 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 STAG3L3P0CL85 134 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 MIFP14174 115 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 FHITP49789 147 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 PDE6HQ13956 83 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 GUK1Q16774 197 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 EBLN2Q6P2I7 272 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 KCNRGQ8N5I3 272 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 TVP23CQ96ET8 276 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 AGPAT4-IT1Q9H0P7 198 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 Q9H3A6 140 aa5.12□□□□□ -1.59
TOPBP1-207ENST00000509162 C17orf112F2Z3M2 114 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 TRIAP1O43715 76 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 DUSP14O95147 198 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 SCGB1D1O95968 90 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 INSP01308 110 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 NBEAP1P0C6P0 100 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 CRISP2P16562 243 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 CDC34P49427 236 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 ZNF266Q14584 549 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 ZNF345Q14585 488 aa5.11□□□□□ -1.59
TOPBP1-207ENST00000509162 KHDC3LQ587J8 217 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms