RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 BTN1A1Q13410 526 aa9.99□□□□□ -0.81
RAB28-205ENST00000508274 FAM122CQ6P4D5 195 aa9.99□□□□□ -0.81
RAB28-205ENST00000508274 LINC00612Q8N6U2 182 aa9.99□□□□□ -0.81
RAB28-205ENST00000508274 RNF141Q8WVD5 230 aa9.99□□□□□ -0.81
RAB28-205ENST00000508274 ATG101Q9BSB4 218 aa9.99□□□□□ -0.81
RAB28-205ENST00000508274 A0A1B0GVG6 124 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 GAGE12BA1L429 117 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 C7orf71A4D174 169 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 SSNA1O43805 119 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 GAGE7O76087 117 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 OR10J4P0C629 311 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 GAGE12FP0CL80 117 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 GAGE12GP0CL81 117 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 GAGE12IP0CL82 117 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 CYCSP99999 105 aaKnown RBP9.98□□□□□ -0.81
RAB28-205ENST00000508274 CD300CQ08708 224 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 FAM19A4Q96LR4 140 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 AGPAT4-IT1Q9H0P7 198 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 PRELID1Q9Y255 219 aa9.98□□□□□ -0.81
RAB28-205ENST00000508274 SNURFLB1AK76 121 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 KLLNB2CW77 178 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 MPC2O95563 127 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 NBEAP1P0C6P0 100 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 FXYD5Q96DB9 178 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 PHYHIPLQ96FC7 376 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 ATP5SQ99766 215 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 PYGO2Q9BRQ0 406 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 OR51M1Q9H341 326 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 AAMDCQ9H7C9 122 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
RAB28-205ENST00000508274 ZNF324O75467 553 aaPredicted RBP9.97□□□□□ -0.81
RAB28-205ENST00000508274 SLC25A5P05141 298 aaKnown RBP9.97□□□□□ -0.81
RAB28-205ENST00000508274 HOXA5P20719 270 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 OR5I1Q13606 314 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 PRR9Q5T870 116 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 Q6ZQT7 251 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 Q6ZTI0 123 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 ZNF503Q96F45 646 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 VGLL1Q99990 258 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 PAXXQ9BUH6 204 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 MRPL32Q9BYC8 188 aaKnown RBP9.97□□□□□ -0.81
RAB28-205ENST00000508274 SMIM3Q9BZL3 60 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 FUT9Q9Y231 359 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 HSPB11Q9Y547 144 aa9.97□□□□□ -0.81
RAB28-205ENST00000508274 TRAV26-1A0A087WT03 109 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 A0A0J9YY99 117 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
RAB28-205ENST00000508274 RNASE4P34096 147 aaKnown RBP9.96□□□□□ -0.82
RAB28-205ENST00000508274 DEFA1P59665 94 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 DEFA3P59666 94 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 C9orf47Q6ZRZ4 202 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 C11orf72Q8NBR9 251 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 ZNRF2Q8NHG8 242 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 MBD2Q9UBB5 411 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.82
RAB28-205ENST00000508274 C17orf112F2Z3M2 114 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 OR7C2O60412 319 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 CRISP2P16562 243 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 FAM3BP58499 235 aaPredicted RBP9.95□□□□□ -0.82
RAB28-205ENST00000508274 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 LINC00528Q8N1L1 170 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 Q8TAT8 98 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 TMPRSS5Q9H3S3 457 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 GSN-AS1Q9NRJ2 163 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 DNAH11Q96DT5 4516 aa9.95□□□□□ -0.82
RAB28-205ENST00000508274 PET100P0DJ07 73 aa9.94□□□□□ -0.82
RAB28-205ENST00000508274 RPL12P30050 165 aaKnown RBP9.94□□□□□ -0.82
RAB28-205ENST00000508274 CCL18P55774 89 aa9.94□□□□□ -0.82
RAB28-205ENST00000508274 DAZ2Q13117 558 aaKnown RBP9.94□□□□□ -0.82
RAB28-205ENST00000508274 TMEM78Q5T7P6 136 aa9.94□□□□□ -0.82
RAB28-205ENST00000508274 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
RAB28-205ENST00000508274 GNPNAT1Q96EK6 184 aaPredicted RBP9.94□□□□□ -0.82
RAB28-205ENST00000508274 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
RAB28-205ENST00000508274 GPX1P07203 203 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 M6PRP20645 277 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 UBE2L3P68036 154 aaKnown RBP9.93□□□□□ -0.82
RAB28-205ENST00000508274 SSX7Q7RTT5 188 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 KRTAP17-1Q9BYP8 105 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 ZNF492Q9P255 531 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 KLF12Q9Y4X4 402 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 MUC4Q99102 2169 aa9.93□□□□□ -0.82
RAB28-205ENST00000508274 NBDYA0A0U1RRE5 68 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 RANP62826 216 aaKnown RBP9.92□□□□□ -0.82
RAB28-205ENST00000508274 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
RAB28-205ENST00000508274 ZNF680Q8NEM1 530 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 RXFP4Q8TDU9 374 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 Q9H3A6 140 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 TRGV1A0A0A0MS02 117 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 IFNA5P01569 189 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 ANXA2RQ3ZCQ2 193 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 SOHLH1Q5JUK2 328 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 LCE2AQ5TA79 106 aaPredicted RBP9.92□□□□□ -0.82
RAB28-205ENST00000508274 Q6ZNX1 250 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 SCGB1C1Q8TD33 95 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 LINC00467Q9BRT7 94 aa9.92□□□□□ -0.82
RAB28-205ENST00000508274 ALG5Q9Y673 324 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms