RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 C9orf47Q6ZRZ4 202 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 TRPT1Q86TN4 253 aaKnown RBP10.46□□□□□ -0.73
RNF4-208ENST00000507247 COMMD7Q86VX2 200 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 OR10J6PQ8NGY7 276 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
RNF4-208ENST00000507247 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 IGKV3-20P01619 116 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 CT45A10P0DMU9 189 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 PEA15Q15121 130 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 STHQ8IWL8 128 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 TMEM75Q8N9X5 138 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 OR4B1Q8NGF8 309 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 Q8TAT8 98 aa10.45□□□□□ -0.74
RNF4-208ENST00000507247 DNAH3Q8TD57 4116 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 K7EQM0 130 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 NDUFS6O75380 124 aaKnown RBP10.44□□□□□ -0.74
RNF4-208ENST00000507247 DUSP14O95147 198 aaKnown RBP10.44□□□□□ -0.74
RNF4-208ENST00000507247 IGHV4-30-4P0DP06 118 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 DEFA6Q01524 100 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 FLI1Q01543 452 aaPredicted RBP10.44□□□□□ -0.74
RNF4-208ENST00000507247 AMTNQ6UX39 209 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 ZNF492Q9P255 531 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 PSG8Q9UQ74 426 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 KLF12Q9Y4X4 402 aa10.44□□□□□ -0.74
RNF4-208ENST00000507247 K7EIL1 84 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
RNF4-208ENST00000507247 RPL35P42766 123 aaKnown RBP10.43□□□□□ -0.74
RNF4-208ENST00000507247 TMEM183BQ1AE95 376 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 TMEM78Q5T7P6 136 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 Q86TA4 180 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 TVP23CQ96ET8 276 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 FAM19A4Q96LR4 140 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 LINC00477Q96M19 166 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 SLC35B3Q9H1N7 401 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 TREM1Q9NP99 234 aa10.43□□□□□ -0.74
RNF4-208ENST00000507247 ZNF138P52744 262 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 CEBPGP53567 150 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 FXYD7P58549 80 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 UBE2G1P62253 170 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 PRNTQ86SH4 94 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 FMC1Q96HJ9 113 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 PARLQ9H300 379 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 TUBA4BQ9H853 241 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 PPP1R14DQ9NXH3 145 aa10.42□□□□□ -0.74
RNF4-208ENST00000507247 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 TRBV6-1A0A0K0K1D8 114 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 A8MZ25 164 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 SPINK13Q1W4C9 94 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 EIF4E3Q8N5X7 224 aaKnown RBP10.41□□□□□ -0.74
RNF4-208ENST00000507247 IGF2BP2-AS1Q96M15 143 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 C8orf49Q96NF6 230 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 ODF3Q96PU9 254 aa10.41□□□□□ -0.74
RNF4-208ENST00000507247 LOC102724200A0A096LPH7 203 aaPredicted RBP10.4□□□□□ -0.74
RNF4-208ENST00000507247 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.74
RNF4-208ENST00000507247 M0R2Z0 102 aa10.4□□□□□ -0.74
RNF4-208ENST00000507247 LTAP01374 205 aa10.4□□□□□ -0.74
RNF4-208ENST00000507247 S100A9P06702 114 aaKnown RBP10.4□□□□□ -0.74
RNF4-208ENST00000507247 TAS2R60P59551 318 aa10.4□□□□□ -0.74
RNF4-208ENST00000507247 ZNF674Q2M3X9 581 aa10.4□□□□□ -0.74
RNF4-208ENST00000507247 PRR9Q5T870 116 aa10.4□□□□□ -0.74
RNF4-208ENST00000507247 UQCC3Q6UW78 93 aa10.4□□□□□ -0.74
RNF4-208ENST00000507247 LINC00322Q6ZN03 302 aaPredicted RBP10.4□□□□□ -0.74
RNF4-208ENST00000507247 ZFAND2AQ8N6M9 145 aa10.4□□□□□ -0.74
RNF4-208ENST00000507247 J3KRW8 73 aa10.39□□□□□ -0.75
RNF4-208ENST00000507247 IGLV2-8P01709 118 aa10.39□□□□□ -0.75
RNF4-208ENST00000507247 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
RNF4-208ENST00000507247 CRISP2P16562 243 aa10.39□□□□□ -0.75
RNF4-208ENST00000507247 CENPWQ5EE01 88 aa10.39□□□□□ -0.75
RNF4-208ENST00000507247 NHLRC2Q8NBF2 726 aa10.39□□□□□ -0.75
RNF4-208ENST00000507247 LENEPQ9Y5L5 61 aa10.39□□□□□ -0.75
RNF4-208ENST00000507247 TRAV12-2A0A075B6T6 113 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 TRBV7-9A0A0J9YWB2 115 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 PGPEP1LA6NFU8 196 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 KLLNB2CW77 178 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 CRXO43186 299 aaPredicted RBP10.38□□□□□ -0.75
RNF4-208ENST00000507247 SFTA3P0C7M3 94 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 LEPP41159 167 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 CDKN1BP46527 198 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 BAGE2Q86Y30 109 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 SLC7A5P1Q8MH63 180 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 SMIM7Q9BQ49 75 aa10.38□□□□□ -0.75
RNF4-208ENST00000507247 ZNF727A8MUV8 499 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 C9JCJ5 164 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
RNF4-208ENST00000507247 TMEM183AQ8IXX5 376 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 NDFIP1Q9BT67 221 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 MLST8Q9BVC4 326 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 CSTL1Q9H114 145 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 XCL2Q9UBD3 114 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 ZFP30Q9Y2G7 519 aa10.37□□□□□ -0.75
RNF4-208ENST00000507247 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
RNF4-208ENST00000507247 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
RNF4-208ENST00000507247 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 ADCYAP1P18509 176 aa10.36□□□□□ -0.75
RNF4-208ENST00000507247 TSPOP30536 169 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms