RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PGPA6NDG6 321 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF705FA8MVS1 300 aaPredicted RBP6.19□□□□□ -1.42
PDGFC-205ENST00000506880 KLLNB2CW77 178 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 H7BYZ3 331 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 PDE6DO43924 150 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 PRB2P02812 416 aaPredicted RBP6.19□□□□□ -1.42
PDGFC-205ENST00000506880 OR10J4P0C629 311 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF705DP0CH99 300 aaPredicted RBP6.19□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF705BP0CI00 300 aaPredicted RBP6.19□□□□□ -1.42
PDGFC-205ENST00000506880 SMCPP49901 116 aaPredicted RBP6.19□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF138P52744 262 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 HIST1H1AQ02539 215 aaPredicted RBP6.19□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF726P1Q15940 193 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 COX8CQ7Z4L0 72 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 CSNK1G2-AS1Q8NCQ2 148 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 OR4B1Q8NGF8 309 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 FAM213BQ8TBF2 198 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 SFT2D1Q8WV19 159 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 FAM19A4Q96LR4 140 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 OVOL2Q9BRP0 275 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 PYGO2Q9BRQ0 406 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF492Q9P255 531 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 TP53TG3Q9ULZ0 132 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 ZFP30Q9Y2G7 519 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 KLF12Q9Y4X4 402 aa6.19□□□□□ -1.42
PDGFC-205ENST00000506880 FAM74A7A6NL05 159 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 KNCNA6PVL3 124 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 TCRAP04437 139 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 GIG44P09565 113 aaPredicted RBP6.18□□□□□ -1.42
PDGFC-205ENST00000506880 TAS2R60P59551 318 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 RNF182Q8N6D2 247 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 FMC1Q96HJ9 113 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 NDUFAF3Q9BU61 184 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 WFDC10AQ9H1F0 79 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 EPDR1Q9UM22 224 aa6.18□□□□□ -1.42
PDGFC-205ENST00000506880 RPL35AP18077 110 aaKnown RBP6.17□□□□□ -1.42
PDGFC-205ENST00000506880 SUMO1P63165 101 aaKnown RBP6.17□□□□□ -1.42
PDGFC-205ENST00000506880 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 Q6AWC8 147 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 TEX261Q6UWH6 196 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 EXOC3-AS1Q8N2X6 119 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF680Q8NEM1 530 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 WWC2-AS2Q96NR7 200 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 RARRES2Q99969 163 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 NIPSNAP3BQ9BS92 247 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 BIN3Q9NQY0 253 aa6.17□□□□□ -1.42
PDGFC-205ENST00000506880 TENM3Q9P273 2699 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 GGTLC3B5MD39 225 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 TMEM250H0YL14 139 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 M0R3E3 92 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 TDRG1Q3Y452 100 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 ANXA2RQ3ZCQ2 193 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 IBA57Q5T440 356 aaKnown RBP6.16□□□□□ -1.42
PDGFC-205ENST00000506880 GDF5OSQ5U4N7 250 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 OR11H2Q8NH07 326 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 C11orf52Q96A22 123 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 KCNS1Q96KK3 526 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 AGPAT4-IT1Q9H0P7 198 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 VAX2Q9UIW0 290 aa6.16□□□□□ -1.42
PDGFC-205ENST00000506880 TRAV21A0A0B4J279 112 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 C7orf71A4D174 169 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 LYRM9A8MSI8 78 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 C3orf84H3BNL1 204 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 J3QL48 77 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 PEX7O00628 323 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 CRXO43186 299 aaPredicted RBP6.15□□□□□ -1.42
PDGFC-205ENST00000506880 GPX1P07203 203 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 CT45A10P0DMU9 189 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 TCTAP57738 103 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 FLI1Q01543 452 aaPredicted RBP6.15□□□□□ -1.42
PDGFC-205ENST00000506880 MEF2BQ02080 365 aaPredicted RBP6.15□□□□□ -1.42
PDGFC-205ENST00000506880 CD300CQ08708 224 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 TMEM183BQ1AE95 376 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 RRN3P1Q2M238 152 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 PIK3CD-AS1Q5SR53 167 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 ZNF767PQ75MW2 155 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 SSX7Q7RTT5 188 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 IQCF2Q8IXL9 164 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 TMEM263Q8WUH6 116 aaKnown RBP6.15□□□□□ -1.42
PDGFC-205ENST00000506880 ASCL2Q99929 193 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 TMPRSS5Q9H3S3 457 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 XCL2Q9UBD3 114 aa6.15□□□□□ -1.42
PDGFC-205ENST00000506880 C11orf94C9JXX5 98 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 F6UB75 175 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 CIDEAO60543 219 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 CXCL1P09341 107 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 BCL2P10415 239 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 UBE2G1P62253 170 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 ZNF124Q15973 351 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 SMUG1Q53HV7 270 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 CST9LP1Q5W188 147 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 GOLT1AQ6ZVE7 132 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 ZFAND2AQ8N6M9 145 aa6.14□□□□□ -1.43
PDGFC-205ENST00000506880 Q8NAQ8 132 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms