RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
MED28-204ENST00000506409 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
MED28-204ENST00000506409 CCDC28AQ8IWP9 274 aa11.03□□□□□ -0.64
MED28-204ENST00000506409 LYPD1Q8N2G4 141 aa11.03□□□□□ -0.64
MED28-204ENST00000506409 HSD17B11Q8NBQ5 300 aa11.03□□□□□ -0.64
MED28-204ENST00000506409 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
MED28-204ENST00000506409 FAM210BQ96KR6 192 aa11.03□□□□□ -0.64
MED28-204ENST00000506409 TIMM8BQ9Y5J9 83 aaPredicted RBP11.03□□□□□ -0.64
MED28-204ENST00000506409 FXYD6-FXYD2A0A087WZ82 144 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 CSN1S1P47710 185 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 OR10G4Q8NGN3 311 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 OR10G9Q8NGN4 311 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 OR10G7Q8NGN6 311 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 OR2T35Q8NGX2 323 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 FAM19A4Q96LR4 140 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 VGLL1Q99990 258 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 Q9H3A6 140 aa11.02□□□□□ -0.65
MED28-204ENST00000506409 C7orf71A4D174 169 aa11.01□□□□□ -0.65
MED28-204ENST00000506409 KLLNB2CW77 178 aa11.01□□□□□ -0.65
MED28-204ENST00000506409 PQLC2Q6ZP29 291 aa11.01□□□□□ -0.65
MED28-204ENST00000506409 OR2G3Q8NGZ4 309 aa11.01□□□□□ -0.65
MED28-204ENST00000506409 PYGO2Q9BRQ0 406 aa11.01□□□□□ -0.65
MED28-204ENST00000506409 PSMG3Q9BT73 122 aaPredicted RBP11.01□□□□□ -0.65
MED28-204ENST00000506409 NOP10Q9NPE3 64 aaKnown RBP11.01□□□□□ -0.65
MED28-204ENST00000506409 RNF222A6NCQ9 220 aa11□□□□□ -0.65
MED28-204ENST00000506409 HMGB3O15347 200 aaKnown RBP11□□□□□ -0.65
MED28-204ENST00000506409 GPX1P07203 203 aa11□□□□□ -0.65
MED28-204ENST00000506409 NMBP08949 121 aa11□□□□□ -0.65
MED28-204ENST00000506409 CRISP2P16562 243 aa11□□□□□ -0.65
MED28-204ENST00000506409 ATP6V0CP27449 155 aa11□□□□□ -0.65
MED28-204ENST00000506409 CD300CQ08708 224 aa11□□□□□ -0.65
MED28-204ENST00000506409 BTN1A1Q13410 526 aa11□□□□□ -0.65
MED28-204ENST00000506409 ZNF492Q9P255 531 aa11□□□□□ -0.65
MED28-204ENST00000506409 TNFSF18Q9UNG2 199 aa11□□□□□ -0.65
MED28-204ENST00000506409 P0DMU3 169 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 FAM231AP0DMU4 169 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 FAM231CP0DMU5 169 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 RNASE4P34096 147 aaKnown RBP10.99□□□□□ -0.65
MED28-204ENST00000506409 CDC34P49427 236 aaPredicted RBP10.99□□□□□ -0.65
MED28-204ENST00000506409 ZNF138P52744 262 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 TMEM88Q6PEY1 159 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 Q8TAT8 98 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 RXFP4Q8TDU9 374 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 HYLS1Q96M11 299 aa10.99□□□□□ -0.65
MED28-204ENST00000506409 RBAKDNA6NC62 111 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 SNURFLB1AK76 121 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 ZNF324O75467 553 aaPredicted RBP10.98□□□□□ -0.65
MED28-204ENST00000506409 MBP02144 154 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 ATP5G1P05496 136 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 ATP5G3P48201 142 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 SERF2P84101 59 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 FAM74A1Q5RGS3 127 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 ZFAND2AQ8N6M9 145 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 CMTM2Q8TAZ6 248 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 OTORQ9NRC9 128 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 VPS13DQ5THJ4 4388 aa10.98□□□□□ -0.65
MED28-204ENST00000506409 BORCS7-ASMTA0A0B4J1R7 106 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 TRBV7-9A0A0J9YWB2 115 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 PGPA6NDG6 321 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 CBY3A6NI87 242 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 F5H768 121 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 G3V3Q6 166 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 ARL14EPLP0DKL9 152 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 PRR9Q5T870 116 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 RPL7L1Q6DKI1 246 aaKnown RBP10.97□□□□□ -0.65
MED28-204ENST00000506409 GNPNAT1Q96EK6 184 aaPredicted RBP10.97□□□□□ -0.65
MED28-204ENST00000506409 KMT2AQ03164 3969 aa10.97□□□□□ -0.65
MED28-204ENST00000506409 STAG3L2P0CL84 134 aa10.96□□□□□ -0.65
MED28-204ENST00000506409 STAG3L3P0CL85 134 aa10.96□□□□□ -0.65
MED28-204ENST00000506409 EIF4E3Q8N5X7 224 aaKnown RBP10.96□□□□□ -0.65
MED28-204ENST00000506409 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
MED28-204ENST00000506409 ZNF680Q8NEM1 530 aa10.96□□□□□ -0.65
MED28-204ENST00000506409 RAB24Q969Q5 203 aa10.96□□□□□ -0.65
MED28-204ENST00000506409 LINC00467Q9BRT7 94 aa10.96□□□□□ -0.65
MED28-204ENST00000506409 RPH3ALQ9UNE2 315 aa10.96□□□□□ -0.65
MED28-204ENST00000506409 RGS13O14921 159 aa10.95□□□□□ -0.66
MED28-204ENST00000506409 ARPC5O15511 151 aa10.95□□□□□ -0.66
MED28-204ENST00000506409 LINC00612Q8N6U2 182 aa10.95□□□□□ -0.66
MED28-204ENST00000506409 C15orf53Q8NAA6 179 aa10.95□□□□□ -0.66
MED28-204ENST00000506409 GAGE12BA1L429 117 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 GAGE7O76087 117 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 GAGE12FP0CL80 117 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 GAGE12GP0CL81 117 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 GAGE12IP0CL82 117 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 DAZ2Q13117 558 aaKnown RBP10.94□□□□□ -0.66
MED28-204ENST00000506409 ANXA2RQ3ZCQ2 193 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 UBE2DNLQ8IWF7 75 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 C11orf72Q8NBR9 251 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 ACTR3CQ9C0K3 210 aaPredicted RBP10.94□□□□□ -0.66
MED28-204ENST00000506409 GSN-AS1Q9NRJ2 163 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 LENEPQ9Y5L5 61 aa10.94□□□□□ -0.66
MED28-204ENST00000506409 IGHV1OR15-1A0A075B7D0 117 aa10.93□□□□□ -0.66
MED28-204ENST00000506409 SMLR1H3BR10 107 aa10.93□□□□□ -0.66
MED28-204ENST00000506409 TAAR5O14804 337 aa10.93□□□□□ -0.66
MED28-204ENST00000506409 GCHFRP30047 84 aa10.93□□□□□ -0.66
MED28-204ENST00000506409 Q6ZQT7 251 aa10.93□□□□□ -0.66
MED28-204ENST00000506409 GOLT1AQ6ZVE7 132 aa10.93□□□□□ -0.66
MED28-204ENST00000506409 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms