RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TCTAP57738 103 aa12.48□□□□□ -0.41
SCLT1-208ENST00000506368 LYRM7Q5U5X0 104 aa12.48□□□□□ -0.41
SCLT1-208ENST00000506368 TMEM200BQ69YZ2 307 aa12.48□□□□□ -0.41
SCLT1-208ENST00000506368 Q8N8P6 123 aa12.48□□□□□ -0.41
SCLT1-208ENST00000506368 TPSG1Q9NRR2 321 aa12.48□□□□□ -0.41
SCLT1-208ENST00000506368 TRAV26-1A0A087WT03 109 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 APOMO95445 188 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 CRYBA4P53673 196 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 FOXI1Q12951 378 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 TMEM108Q6UXF1 575 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 C8orf49Q96NF6 230 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 SIGLEC9Q9Y336 463 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 CCL3L1P16619 93 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 CD40P25942 277 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 C8orf86Q6ZUL3 223 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 OR11H1Q8NG94 326 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 MYOZ3Q8TDC0 251 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 TMEM158Q8WZ71 300 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 RNF5Q99942 180 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 FOXC2Q99958 501 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 RAB1BQ9H0U4 201 aa12.47□□□□□ -0.41
SCLT1-208ENST00000506368 IGSF10Q6WRI0 2623 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 TNFRSF6BO95407 300 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 IGKV1-17P01599 117 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 RBP4P02753 201 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 ZNF474Q6S9Z5 364 aaPredicted RBP12.46□□□□□ -0.41
SCLT1-208ENST00000506368 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 GTSCR1Q86UQ5 136 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 RNF125Q96EQ8 232 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
SCLT1-208ENST00000506368 ZFYVE26Q68DK2 2539 aa12.46□□□□□ -0.42
SCLT1-208ENST00000506368 A6NJY4 79 aa12.46□□□□□ -0.42
SCLT1-208ENST00000506368 TEX22C9J3V5 150 aa12.46□□□□□ -0.42
SCLT1-208ENST00000506368 PPP1R27Q86WC6 154 aa12.46□□□□□ -0.42
SCLT1-208ENST00000506368 PRR25Q96S07 402 aa12.46□□□□□ -0.42
SCLT1-208ENST00000506368 HIST1H4GQ99525 98 aa12.46□□□□□ -0.42
SCLT1-208ENST00000506368 TLN1Q9Y490 2541 aaKnown RBP12.45□□□□□ -0.42
SCLT1-208ENST00000506368 TRBV7-3A0A075B6L6 115 aa12.45□□□□□ -0.42
SCLT1-208ENST00000506368 FXYD7P58549 80 aa12.45□□□□□ -0.42
SCLT1-208ENST00000506368 LY6DQ14210 128 aa12.45□□□□□ -0.42
SCLT1-208ENST00000506368 Q71RC1 249 aaPredicted RBP12.45□□□□□ -0.42
SCLT1-208ENST00000506368 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
SCLT1-208ENST00000506368 DLX4Q92988 240 aaPredicted RBP12.45□□□□□ -0.42
SCLT1-208ENST00000506368 KMT2BQ9UMN6 2715 aaPredicted RBP12.44□□□□□ -0.42
SCLT1-208ENST00000506368 A0A087WX48 190 aa12.44□□□□□ -0.42
SCLT1-208ENST00000506368 NDUFB3O43676 98 aa12.44□□□□□ -0.42
SCLT1-208ENST00000506368 ENSAO43768 121 aaKnown RBP12.44□□□□□ -0.42
SCLT1-208ENST00000506368 TRAV12-1A0A0B4J245 112 aa12.44□□□□□ -0.42
SCLT1-208ENST00000506368 MBD3L4A6NDZ8 208 aaPredicted RBP12.44□□□□□ -0.42
SCLT1-208ENST00000506368 MBD3L3A6NE82 208 aaPredicted RBP12.44□□□□□ -0.42
SCLT1-208ENST00000506368 MBD3L5A6NJ08 208 aaPredicted RBP12.44□□□□□ -0.42
SCLT1-208ENST00000506368 TSPAN13O95857 204 aa12.44□□□□□ -0.42
SCLT1-208ENST00000506368 MBD3L2Q8NHZ7 208 aaPredicted RBP12.44□□□□□ -0.42
SCLT1-208ENST00000506368 RPEQ96AT9 228 aa12.44□□□□□ -0.42
SCLT1-208ENST00000506368 C17orf77Q96MU5 243 aa12.44□□□□□ -0.42
SCLT1-208ENST00000506368 TMSB15BA0A087X1C1 80 aa12.43□□□□□ -0.42
SCLT1-208ENST00000506368 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
SCLT1-208ENST00000506368 EGR2P11161 476 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-208ENST00000506368 DIAPH2-AS1Q14236 149 aa12.43□□□□□ -0.42
SCLT1-208ENST00000506368 C5orf64Q2M2E5 130 aa12.43□□□□□ -0.42
SCLT1-208ENST00000506368 Q5PR19 223 aa12.43□□□□□ -0.42
SCLT1-208ENST00000506368 CFAP126Q5VTH2 177 aa12.43□□□□□ -0.42
SCLT1-208ENST00000506368 NUP37Q8NFH4 326 aa12.43□□□□□ -0.42
SCLT1-208ENST00000506368 HOXA3O43365 443 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-208ENST00000506368 IGHV3-21A0A0B4J1V1 117 aa12.42□□□□□ -0.42
SCLT1-208ENST00000506368 M0R3E3 92 aa12.42□□□□□ -0.42
SCLT1-208ENST00000506368 IL4P05112 153 aa12.42□□□□□ -0.42
SCLT1-208ENST00000506368 SPINK8P0C7L1 97 aa12.42□□□□□ -0.42
SCLT1-208ENST00000506368 DLX6P56179 175 aa12.42□□□□□ -0.42
SCLT1-208ENST00000506368 WFDC3Q8IUB2 231 aa12.42□□□□□ -0.42
SCLT1-208ENST00000506368 TMEM160Q9NX00 188 aa12.42□□□□□ -0.42
SCLT1-208ENST00000506368 HEATR1Q9H583 2144 aaKnown RBP12.42□□□□□ -0.42
SCLT1-208ENST00000506368 IGLV2-18A0A075B6J9 118 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 TRAV40A0A0B4J280 105 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 RPL7P18124 248 aaKnown RBP12.41□□□□□ -0.42
SCLT1-208ENST00000506368 LAGE3Q14657 143 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 TTTY13Q9BZ97 58 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 TMEM155Q4W5P6 130 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 IGFL2Q6UWQ7 119 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 WFDC12Q8WWY7 111 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 CDIP1Q9H305 208 aa12.41□□□□□ -0.42
SCLT1-208ENST00000506368 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
SCLT1-208ENST00000506368 RALYQ9UKM9 306 aaKnown RBP12.41□□□□□ -0.42
SCLT1-208ENST00000506368 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
SCLT1-208ENST00000506368 FABP5P3A8MUU1 101 aa12.4□□□□□ -0.42
SCLT1-208ENST00000506368 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.42
SCLT1-208ENST00000506368 OR11H6Q8NGC7 330 aa12.4□□□□□ -0.42
SCLT1-208ENST00000506368 PPDPFLQ8WWR9 84 aa12.4□□□□□ -0.42
SCLT1-208ENST00000506368 KAAG1Q9UBP8 84 aa12.4□□□□□ -0.42
SCLT1-208ENST00000506368 RELNP78509 3460 aa12.4□□□□□ -0.43
SCLT1-208ENST00000506368 TRAV17A0A0B4J275 112 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 F8VRH5 84 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 C16orf97H3BN30 126 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 H7C1H1 209 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 K7EIM0 57 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 ATP5G2Q06055 141 aa12.39□□□□□ -0.43
SCLT1-208ENST00000506368 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms