RNA–Protein interactions for RNA: ENST00000505854.5

SNX2-202, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 908 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-202ENST00000505854 IGKV2-40A0A087WW87 121 aaPredicted RBP12.97□□□□□ -0.33
SNX2-202ENST00000505854 J3KRW8 73 aa12.97□□□□□ -0.33
SNX2-202ENST00000505854 IGKV2D-40P01614 121 aaPredicted RBP12.97□□□□□ -0.33
SNX2-202ENST00000505854 NMBP08949 121 aa12.97□□□□□ -0.33
SNX2-202ENST00000505854 DEFB130BP0DP73 79 aa12.97□□□□□ -0.33
SNX2-202ENST00000505854 DEFB130AP0DP74 79 aa12.97□□□□□ -0.33
SNX2-202ENST00000505854 CSN1S1P47710 185 aa12.97□□□□□ -0.33
SNX2-202ENST00000505854 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
SNX2-202ENST00000505854 RNASE8Q8TDE3 154 aaKnown RBP12.97□□□□□ -0.33
SNX2-202ENST00000505854 VPS13DQ5THJ4 4388 aa12.97□□□□□ -0.33
SNX2-202ENST00000505854 C7orf71A4D174 169 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 KLLNB2CW77 178 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 CRISP2P16562 243 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 RAB2AP61019 212 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 PQLC2Q6ZP29 291 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 HSD17B11Q8NBQ5 300 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 OR10G4Q8NGN3 311 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 OR2G3Q8NGZ4 309 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 VGLL1Q99990 258 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 PYGO2Q9BRQ0 406 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 PSMG3Q9BT73 122 aaPredicted RBP12.96□□□□□ -0.33
SNX2-202ENST00000505854 Q9H3A6 140 aa12.96□□□□□ -0.33
SNX2-202ENST00000505854 RBAKDNA6NC62 111 aa12.95□□□□□ -0.34
SNX2-202ENST00000505854 P0DMU3 169 aa12.95□□□□□ -0.34
SNX2-202ENST00000505854 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
SNX2-202ENST00000505854 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
SNX2-202ENST00000505854 OR2T35Q8NGX2 323 aa12.95□□□□□ -0.34
SNX2-202ENST00000505854 FXYD6-FXYD2A0A087WZ82 144 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 CBY3A6NI87 242 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 GPX1P07203 203 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 RNASE4P34096 147 aaKnown RBP12.94□□□□□ -0.34
SNX2-202ENST00000505854 ZNF138P52744 262 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 SERF2P84101 59 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
SNX2-202ENST00000505854 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 TNFSF18Q9UNG2 199 aa12.94□□□□□ -0.34
SNX2-202ENST00000505854 ZNF324O75467 553 aaPredicted RBP12.93□□□□□ -0.34
SNX2-202ENST00000505854 MBP02144 154 aa12.93□□□□□ -0.34
SNX2-202ENST00000505854 ATP6V0CP27449 155 aa12.93□□□□□ -0.34
SNX2-202ENST00000505854 CD300CQ08708 224 aa12.93□□□□□ -0.34
SNX2-202ENST00000505854 LINC00467Q9BRT7 94 aa12.93□□□□□ -0.34
SNX2-202ENST00000505854 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
SNX2-202ENST00000505854 RNF222A6NCQ9 220 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 SNURFLB1AK76 121 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 EIF3GO75821 320 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNX2-202ENST00000505854 ATP5G1P05496 136 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 ATP5G3P48201 142 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 BTN1A1Q13410 526 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 TMEM88Q6PEY1 159 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 ZFAND2AQ8N6M9 145 aa12.92□□□□□ -0.34
SNX2-202ENST00000505854 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
SNX2-202ENST00000505854 BORCS7-ASMTA0A0B4J1R7 106 aa12.91□□□□□ -0.34
SNX2-202ENST00000505854 PGPA6NDG6 321 aa12.91□□□□□ -0.34
SNX2-202ENST00000505854 DIRC3C9JPN6 131 aa12.91□□□□□ -0.34
SNX2-202ENST00000505854 CDC34P49427 236 aaPredicted RBP12.91□□□□□ -0.34
SNX2-202ENST00000505854 ARL6IP6Q8N6S5 226 aa12.91□□□□□ -0.34
SNX2-202ENST00000505854 POM121L12Q8N7R1 296 aa12.91□□□□□ -0.34
SNX2-202ENST00000505854 CMTM2Q8TAZ6 248 aa12.91□□□□□ -0.34
SNX2-202ENST00000505854 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
SNX2-202ENST00000505854 F5H768 121 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 HMGB3O15347 200 aaKnown RBP12.9□□□□□ -0.34
SNX2-202ENST00000505854 STAG3L2P0CL84 134 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 STAG3L3P0CL85 134 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 DAZ2Q13117 558 aaKnown RBP12.9□□□□□ -0.34
SNX2-202ENST00000505854 ANXA2RQ3ZCQ2 193 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 RPL7L1Q6DKI1 246 aaKnown RBP12.9□□□□□ -0.34
SNX2-202ENST00000505854 EIF4E3Q8N5X7 224 aaKnown RBP12.9□□□□□ -0.34
SNX2-202ENST00000505854 LINC00612Q8N6U2 182 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 C15orf53Q8NAA6 179 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 ZNF680Q8NEM1 530 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 RAB24Q969Q5 203 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 HYLS1Q96M11 299 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 LENEPQ9Y5L5 61 aa12.9□□□□□ -0.34
SNX2-202ENST00000505854 ARL14EPLP0DKL9 152 aa12.89□□□□□ -0.35
SNX2-202ENST00000505854 Q8TAT8 98 aa12.89□□□□□ -0.35
SNX2-202ENST00000505854 TMED6Q8WW62 240 aa12.89□□□□□ -0.35
SNX2-202ENST00000505854 SH3BGRL3Q9H299 93 aa12.89□□□□□ -0.35
SNX2-202ENST00000505854 G3V3Q6 166 aa12.88□□□□□ -0.35
SNX2-202ENST00000505854 PRR9Q5T870 116 aa12.88□□□□□ -0.35
SNX2-202ENST00000505854 ACTR3CQ9C0K3 210 aaPredicted RBP12.88□□□□□ -0.35
SNX2-202ENST00000505854 TAAR5O14804 337 aa12.87□□□□□ -0.35
SNX2-202ENST00000505854 RGS13O14921 159 aa12.87□□□□□ -0.35
SNX2-202ENST00000505854 RNF212Q495C1 297 aa12.87□□□□□ -0.35
SNX2-202ENST00000505854 C11orf72Q8NBR9 251 aa12.87□□□□□ -0.35
SNX2-202ENST00000505854 SUN5Q8TC36 379 aa12.87□□□□□ -0.35
SNX2-202ENST00000505854 GSN-AS1Q9NRJ2 163 aa12.87□□□□□ -0.35
SNX2-202ENST00000505854 EPPK1P58107 5090 aaKnown RBP12.86□□□□□ -0.35
SNX2-202ENST00000505854 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
SNX2-202ENST00000505854 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
SNX2-202ENST00000505854 GAGE7O76087 117 aa12.86□□□□□ -0.35
SNX2-202ENST00000505854 CXorf1O96002 111 aa12.86□□□□□ -0.35
SNX2-202ENST00000505854 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
SNX2-202ENST00000505854 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
SNX2-202ENST00000505854 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
SNX2-202ENST00000505854 GCHFRP30047 84 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms