RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
SNHG4-202ENST00000505522 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
SNHG4-202ENST00000505522 A0A096LPF7 62 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 KLLNB2CW77 178 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 PYYP10082 97 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 HIST1H1EP10412 219 aaKnown RBP8.42□□□□□ -1.06
SNHG4-202ENST00000505522 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 BTN1A1Q13410 526 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 GCSAMLQ5JQS6 135 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 EXOC3-AS1Q8N2X6 119 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 BLNKQ8WV28 456 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
SNHG4-202ENST00000505522 TRGV2A0A075B6R0 118 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
SNHG4-202ENST00000505522 STX12Q86Y82 276 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 ZNF680Q8NEM1 530 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 KLF12Q9Y4X4 402 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 TIMM9Q9Y5J7 89 aa8.41□□□□□ -1.06
SNHG4-202ENST00000505522 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
SNHG4-202ENST00000505522 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 A0A1W2PPQ1 181 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 HBG1P69891 147 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 HBG2P69892 147 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 PDE6HQ13956 83 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 PRR9Q5T870 116 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 Q6ZQT7 251 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 EIF4E3Q8N5X7 224 aaKnown RBP8.4□□□□□ -1.06
SNHG4-202ENST00000505522 SLC25A2Q9BXI2 301 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 GPN1Q9HCN4 374 aaPredicted RBP8.4□□□□□ -1.06
SNHG4-202ENST00000505522 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
SNHG4-202ENST00000505522 IGKV2-40A0A087WW87 121 aaPredicted RBP8.39□□□□□ -1.07
SNHG4-202ENST00000505522 SPINK4O60575 86 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 MPDU1O75352 247 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 IGKV2D-40P01614 121 aaPredicted RBP8.39□□□□□ -1.07
SNHG4-202ENST00000505522 GPX1P07203 203 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 CRISP2P16562 243 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 BTF3P20290 206 aaKnown RBP8.39□□□□□ -1.07
SNHG4-202ENST00000505522 TCL1AP56279 114 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 ICAM4Q14773 271 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 FAM167A-AS1Q96KT0 104 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 VGLL1Q99990 258 aa8.39□□□□□ -1.07
SNHG4-202ENST00000505522 LINC00315P59091 139 aa8.38□□□□□ -1.07
SNHG4-202ENST00000505522 NHLH2Q02577 135 aa8.38□□□□□ -1.07
SNHG4-202ENST00000505522 FAM122CQ6P4D5 195 aa8.38□□□□□ -1.07
SNHG4-202ENST00000505522 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
SNHG4-202ENST00000505522 THAP6Q8TBB0 222 aa8.38□□□□□ -1.07
SNHG4-202ENST00000505522 CCDC32Q9BV29 185 aa8.38□□□□□ -1.07
SNHG4-202ENST00000505522 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
SNHG4-202ENST00000505522 FAM240BA0A1B0GVZ2 78 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 NMBP08949 121 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 IBA57Q5T440 356 aaKnown RBP8.37□□□□□ -1.07
SNHG4-202ENST00000505522 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 Q8N1X5 172 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 OR5C1Q8NGR4 320 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 ST6GAL2Q96JF0 529 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
SNHG4-202ENST00000505522 ZNF492Q9P255 531 aa8.37□□□□□ -1.07
SNHG4-202ENST00000505522 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 RGS13O14921 159 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 SIVA1O15304 175 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 PAX4O43316 350 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 SIX6O95475 246 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 OR10J4P0C629 311 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 NBEAP1P0C6P0 100 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 Q8TAT8 98 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 OR51M1Q9H341 326 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 SCRT2Q9NQ03 307 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 OR5AC2Q9NZP5 309 aa8.36□□□□□ -1.07
SNHG4-202ENST00000505522 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
SNHG4-202ENST00000505522 NXPH4O95158 308 aa8.35□□□□□ -1.07
SNHG4-202ENST00000505522 ZNF138P52744 262 aa8.35□□□□□ -1.07
SNHG4-202ENST00000505522 FHL2Q14192 279 aa8.35□□□□□ -1.07
SNHG4-202ENST00000505522 PHYHIPLQ96FC7 376 aa8.35□□□□□ -1.07
SNHG4-202ENST00000505522 PAXXQ9BUH6 204 aa8.35□□□□□ -1.07
SNHG4-202ENST00000505522 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
SNHG4-202ENST00000505522 H0YIZ8 118 aa8.34□□□□□ -1.07
SNHG4-202ENST00000505522 FUSP35637 526 aaKnown RBP eCLIP8.34□□□□□ -1.07
SNHG4-202ENST00000505522 CRYBA4P53673 196 aa8.34□□□□□ -1.07
SNHG4-202ENST00000505522 ASAH1Q13510 395 aa8.34□□□□□ -1.07
SNHG4-202ENST00000505522 LRRC37A5PQ49AS3 106 aa8.34□□□□□ -1.07
SNHG4-202ENST00000505522 MZT2BQ6NZ67 158 aa8.34□□□□□ -1.07
SNHG4-202ENST00000505522 C8orf49Q96NF6 230 aa8.34□□□□□ -1.07
SNHG4-202ENST00000505522 ARPC5LQ9BPX5 153 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms