RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PCNPQ8WW12 178 aaKnown RBP4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 ST6GAL2Q96JF0 529 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 Q9HAA7 133 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 PSENENQ9NZ42 101 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 MGAT4CQ9UBM8 478 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 TP53TG3Q9ULZ0 132 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 PLA2G2DQ9UNK4 145 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 HHLA3Q9XRX5 114 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 RNF24Q9Y225 148 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 FAT1Q14517 4588 aa4.64□□□□□ -1.67
NPIPB3-203ENST00000504841 TRGV4A0A0C4DH28 118 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 H3BQ15 152 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 GOSR2O14653 212 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 AGPAT2O15120 278 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 SPINK4O60575 86 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 SCGB1D2O95969 90 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 SLC25A5P05141 298 aaKnown RBP4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 METTL15P1P0C7V9 234 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 SLC25A6P12236 298 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 GYPEP15421 78 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 RNASE4P34096 147 aaKnown RBP4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 TCL1AP56279 114 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 CD300CQ08708 224 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 OPCMLQ14982 345 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 PYDC2Q56P42 97 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 MORN5Q5VZ52 161 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 LINC00299Q6ZSB3 139 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 ZNF546Q86UE3 836 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 EIF4E3Q8N5X7 224 aaKnown RBP4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 Q8N814 137 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 NTN5Q8WTR8 489 aaPredicted RBP4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 ODF3Q96PU9 254 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 ARPC5LQ9BPX5 153 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 PXMP4Q9Y6I8 212 aa4.63□□□□□ -1.67
NPIPB3-203ENST00000504841 LRCOL1A6NCL2 159 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 K7EQD1 137 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 M0R3E3 92 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 OR4E1P0C645 316 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 SFTA3P0C7M3 94 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 IGLC2P0DOY2 106 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 SLAQ13239 276 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 PPP1R1AQ13522 171 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 FHL2Q14192 279 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 TMEM128Q5BJH2 165 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 TOMM5Q8N4H5 51 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 C10orf126Q8N4M7 172 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 VGLL1Q99990 258 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 SLC25A21Q9BQT8 299 aaPredicted RBP4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 NPVFQ9HCQ7 196 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 RCL1Q9Y2P8 373 aaKnown RBP4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 V9GYH0 126 aa4.62□□□□□ -1.67
NPIPB3-203ENST00000504841 TRAV5A0A0B4J249 113 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 NAP1L6A6NFF2 107 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 KLLNB2CW77 178 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 K7EP13 123 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 K7EPK0 472 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 MPDU1O75352 247 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 SFT2D2O95562 160 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 PPT1P50897 306 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 ANXA2RQ3ZCQ2 193 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 MUC21Q5SSG8 566 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 IBA57Q5T440 356 aaKnown RBP4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 PXDC1Q5TGL8 231 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 C10orf113Q5VZT2 155 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 Q6ZQT7 251 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 LRTM2Q8N967 370 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 NHLRC2Q8NBF2 726 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 OR10P1Q8NGE3 313 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 TMEM37Q8WXS4 190 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 TRIM63Q969Q1 353 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 SAT2Q96F10 170 aaPredicted RBP4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 ZNF479Q96JC4 524 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 MGST2Q99735 147 aa4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 MRPL32Q9BYC8 188 aaKnown RBP4.61□□□□□ -1.67
NPIPB3-203ENST00000504841 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGHV1OR15-1A0A075B7D0 117 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGKV2-40A0A087WW87 121 aaPredicted RBP4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGHV3-38A0A0C4DH36 116 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 LOC100131303A0A0U1RQF7 123 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 LECT2O14960 151 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGKV2D-40P01614 121 aaPredicted RBP4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGHV3-30P01768 117 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGHV3-33P01772 117 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 GPX1P07203 203 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGHV3-30-3P0DP02 117 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 IGHV3-30-5P0DP03 117 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 CNPY1Q3B7I2 92 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 LINC01620Q4KN68 170 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 PRR9Q5T870 116 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 TMEM14EPQ6UXP3 125 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 BLNKQ8WV28 456 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 TXNDC17Q9BRA2 123 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 SRRQ9GZT4 340 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 BATF3Q9NR55 127 aa4.6□□□□□ -1.67
NPIPB3-203ENST00000504841 CENPXA8MT69 81 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 C9JCJ5 164 aa4.59□□□□□ -1.67
NPIPB3-203ENST00000504841 C1QBP02746 253 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms