RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 H2AFB1P0C5Y9 115 aa9.9□□□□□ -0.82
PDLIM7-211ENST00000504318 AZU1P20160 251 aa9.9□□□□□ -0.82
PDLIM7-211ENST00000504318 TSPOP30536 169 aa9.9□□□□□ -0.82
PDLIM7-211ENST00000504318 KIR3DS1Q14943 382 aa9.9□□□□□ -0.82
PDLIM7-211ENST00000504318 RRN3P1Q2M238 152 aa9.9□□□□□ -0.82
PDLIM7-211ENST00000504318 ACOT6Q3I5F7 207 aaPredicted RBP9.9□□□□□ -0.82
PDLIM7-211ENST00000504318 LCN15Q6UWW0 184 aa9.9□□□□□ -0.82
PDLIM7-211ENST00000504318 TEX48A0A1B0GUV7 120 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 ZNF705GA8MUZ8 300 aaPredicted RBP9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 INSP01308 110 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 RPL29P47914 159 aaKnown RBP9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 HIST1H1AQ02539 215 aaPredicted RBP9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 TOR2AQ5JU69 321 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 FFAR4Q5NUL3 377 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 BPIFA4PQ86YQ2 179 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 RPUSD4Q96CM3 377 aaKnown RBP9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 SLC50A1Q9BRV3 221 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 PKHD1P08F94 4074 aa9.89□□□□□ -0.83
PDLIM7-211ENST00000504318 H3BTX0 84 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 COX7A2P2O60397 106 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 M6PRP20645 277 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 FHITP49789 147 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 PEA15Q15121 130 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 C10orf113Q5VZT2 155 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 FAM210BQ96KR6 192 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 NDUFAF3Q9BU61 184 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 ACTR3CQ9C0K3 210 aaPredicted RBP9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 SMDT1Q9H4I9 107 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 SLC39A9Q9NUM3 307 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 ZNF586Q9NXT0 402 aa9.88□□□□□ -0.83
PDLIM7-211ENST00000504318 CTXND1A0A1B0GTU2 59 aa9.87□□□□□ -0.83
PDLIM7-211ENST00000504318 B2MP61769 119 aa9.87□□□□□ -0.83
PDLIM7-211ENST00000504318 S100A7AQ86SG5 101 aa9.87□□□□□ -0.83
PDLIM7-211ENST00000504318 SFT2D1Q8WV19 159 aa9.87□□□□□ -0.83
PDLIM7-211ENST00000504318 MBD3L1Q8WWY6 194 aa9.87□□□□□ -0.83
PDLIM7-211ENST00000504318 RNF24Q9Y225 148 aa9.87□□□□□ -0.83
PDLIM7-211ENST00000504318 PXMP4Q9Y6I8 212 aa9.87□□□□□ -0.83
PDLIM7-211ENST00000504318 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 MAP1LC3B2A6NCE7 125 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 NDUFB4O95168 129 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 IFNA1P01562 189 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 CDKN1BP46527 198 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 OR10G9Q8NGN4 311 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 OR10G7Q8NGN6 311 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 RNASE8Q8TDE3 154 aaKnown RBP9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 MAP1LC3BQ9GZQ8 125 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 TREM1Q9NP99 234 aa9.86□□□□□ -0.83
PDLIM7-211ENST00000504318 HERC2O95714 4834 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 LYRM9A8MSI8 78 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 ZNF253O75346 499 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 P0DMU3 169 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 TAGLN2P37802 199 aaKnown RBP9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 GUK1Q16774 197 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 Q6ZR54 194 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 TMEM256Q8N2U0 113 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 OR1L4Q8NGR5 311 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 FAM167A-AS1Q96KT0 104 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 TMEM14CQ9P0S9 112 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 PKD1P98161 4303 aa9.85□□□□□ -0.83
PDLIM7-211ENST00000504318 TRBV19A0A075B6N1 114 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 A0A1W2PPV4 95 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 TMEM218A2RU14 115 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 NPIPB6E9PJ23 425 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 RTL8CO15255 209 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 CDC34P49427 236 aaPredicted RBP9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 PPT1P50897 306 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 TAS2R60P59551 318 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 DAD1P61803 113 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 GFI1BQ5VTD9 330 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 TMEM88Q6PEY1 159 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 LINC00612Q8N6U2 182 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 FAM19A4Q96LR4 140 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 PFDN5Q99471 154 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 TMEM208Q9BTX3 173 aa9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 EIF5A2Q9GZV4 153 aaKnown RBP9.84□□□□□ -0.83
PDLIM7-211ENST00000504318 RHOBP62745 196 aa9.83□□□□□ -0.84
PDLIM7-211ENST00000504318 FAM122CQ6P4D5 195 aa9.83□□□□□ -0.84
PDLIM7-211ENST00000504318 CCDC28AQ8IWP9 274 aa9.83□□□□□ -0.84
PDLIM7-211ENST00000504318 MRPL53Q96EL3 112 aaKnown RBP9.83□□□□□ -0.84
PDLIM7-211ENST00000504318 ODF3Q96PU9 254 aa9.83□□□□□ -0.84
PDLIM7-211ENST00000504318 C20orf144Q9BQM9 153 aa9.83□□□□□ -0.84
PDLIM7-211ENST00000504318 SLC25A2Q9BXI2 301 aa9.83□□□□□ -0.84
PDLIM7-211ENST00000504318 RBFOX3A6NFN3 312 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 M0R3E3 92 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 PYYP10082 97 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 ZNF726P1Q15940 193 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 KHDC3LQ587J8 217 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 RAB24Q969Q5 203 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 C16orf74Q96GX8 76 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 LINC01587Q99440 93 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 MANBALQ9NQG1 85 aa9.82□□□□□ -0.84
PDLIM7-211ENST00000504318 A0A1B0GV50 99 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms