RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 SP7Q8TDD2 431 aaPredicted RBP9.15□□□□□ -0.95
AC055713.1-201ENST00000498967 LGALS9BQ3B8N2 356 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 ZNF329Q86UD4 541 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 FAM236AA0A1B0GUQ0 79 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 FAM236BA0A1B0GV22 79 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 BUB3O43684 328 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 MRPL36Q9P0J6 103 aaKnown RBP9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 TRAV3A0A0B4J244 114 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 NDUFC1O43677 76 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 FAM216BQ8N7L0 139 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 DEPPQ9NTK1 212 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 M0R1W7 72 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 SLC25A29Q8N8R3 303 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 LINC01560Q8TB33 94 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 CFHR1Q03591 330 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 TREML4Q6UXN2 200 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 DEFB105AQ8NG35 78 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 A0A087WWL8 130 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 J3QQQ9 107 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 WISP3O95389 354 aaPredicted RBP9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 C20orf173Q96LM9 149 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 TMEM256-PLSCR3K7ERE1 68 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 CELA2BP08218 269 aaPredicted RBP9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 RETNQ9HD89 108 aa9.14□□□□□ -0.95
AC055713.1-201ENST00000498967 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 PRSS46E5RG02 174 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 C5orf64Q2M2E5 130 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 Q6ZWC4 215 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 RHOHQ15669 191 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 TRAV12-2A0A075B6T6 113 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 NXPH4O95158 308 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 HGFACQ04756 655 aa9.13□□□□□ -0.95
AC055713.1-201ENST00000498967 SDHAF1A6NFY7 115 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 LCNL1Q6ZST4 164 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 KLF2Q9Y5W3 355 aaPredicted RBP9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 VPREB1P12018 145 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 GZMMP51124 257 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 IGKV1D-16P01601 117 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 CD55P08174 381 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 C20orf78Q9BR46 151 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 PCNX3Q9H6A9 2034 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 TAF1LQ8IZX4 1826 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 EIF4EBP2Q13542 120 aaPredicted RBP9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 RS1O15537 224 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 FGF16O43320 207 aa9.12□□□□□ -0.95
AC055713.1-201ENST00000498967 LRRK2Q5S007 2527 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 GNLYP22749 145 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 TIRAPP58753 221 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 RFLNBQ8N5W9 214 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 NDUFC2-KCTD14E9PQ53 114 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 TMEM131Q92545 1883 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 COLCA2A8K830 154 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 CDKN1BP46527 198 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 SELENOKQ9Y6D0 94 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 TNRC6BQ9UPQ9 1833 aaKnown RBP9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 ANKRD39Q53RE8 183 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 VMO1Q7Z5L0 202 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 TIMM17AQ99595 171 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 RNF126Q9BV68 326 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 FOXE3Q13461 319 aa9.11□□□□□ -0.95
AC055713.1-201ENST00000498967 C11orf44Q8N8P7 122 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 EXPH5Q8NEV8 1989 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 Q5BKY6 102 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 TRBV12-3P01733 135 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 ZNF664Q8N3J9 261 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 SIGLEC9Q9Y336 463 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 SMIM27A0A1W2PRY6 76 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 CFC1P0CG37 223 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 COX6A1P12074 109 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 SRXN1Q9BYN0 137 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 MSRB2Q9Y3D2 182 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 UBR3Q6ZT12 1888 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 IGHV2-26A0A0B4J1V2 119 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 ZFP36L1Q07352 338 aaKnown RBP9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 AMELYQ99218 206 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 NDUFA4O00483 81 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 ZNF493Q6ZR52 646 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
AC055713.1-201ENST00000498967 H0Y9J4 135 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 NMSQ5H8A3 153 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 ZNF492Q9P255 531 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 ATRAIDQ6UW56 229 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 SBF2Q86WG5 1849 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 IGKV1-5P01602 117 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 CXCL1P09341 107 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 PIN1P1O15428 100 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 C9orf47Q6ZRZ4 202 aa9.09□□□□□ -0.95
AC055713.1-201ENST00000498967 LTAP01374 205 aa9.08□□□□□ -0.96
AC055713.1-201ENST00000498967 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
AC055713.1-201ENST00000498967 PLXNB3Q9ULL4 1909 aa9.08□□□□□ -0.96
AC055713.1-201ENST00000498967 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
AC055713.1-201ENST00000498967 LINC01590Q5TEZ4 76 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms