RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 PRR9Q5T870 116 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 Q6ZQT7 251 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 VGLL1Q99990 258 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 DNAJC4Q9NNZ3 241 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 HHLA3Q9XRX5 114 aa9.92□□□□□ -0.82
TRAF4-212ENST00000498540 ZNF253O75346 499 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 MPDU1O75352 247 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 CAMLGP49069 296 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 TAS2R30P59541 319 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 IAH1Q2TAA2 248 aaPredicted RBP9.91□□□□□ -0.82
TRAF4-212ENST00000498540 MIC13Q5XKP0 118 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 DEDD2Q8WXF8 326 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 MRPL53Q96EL3 112 aaKnown RBP9.91□□□□□ -0.82
TRAF4-212ENST00000498540 BCL7BQ9BQE9 202 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 GGACTQ9BVM4 153 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 AGPAT4-IT1Q9H0P7 198 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 FLVCR2Q9UPI3 526 aa9.91□□□□□ -0.82
TRAF4-212ENST00000498540 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
TRAF4-212ENST00000498540 C7orf66A4D0T2 115 aa9.9□□□□□ -0.82
TRAF4-212ENST00000498540 H3BMQ9 156 aa9.9□□□□□ -0.82
TRAF4-212ENST00000498540 NDUFB4O95168 129 aa9.9□□□□□ -0.82
TRAF4-212ENST00000498540 NRARPQ7Z6K4 114 aa9.9□□□□□ -0.82
TRAF4-212ENST00000498540 TMEM70Q9BUB7 260 aa9.9□□□□□ -0.82
TRAF4-212ENST00000498540 IGLV5-52A0A0A0MRZ9 124 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 E5RGE8 158 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 K7EQD1 137 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 RGS13O14921 159 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 GPX1P07203 203 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 CRISP2P16562 243 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 EVI2AP22794 236 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 SLAQ13239 276 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 Q6ZRG5 221 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 ZFAND2AQ8N6M9 145 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 LINC00477Q96M19 166 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 GSKIPQ9P0R6 139 aa9.89□□□□□ -0.83
TRAF4-212ENST00000498540 IGHV1OR15-1A0A075B7D0 117 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 IGKV2-40A0A087WW87 121 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-212ENST00000498540 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 K7EP13 123 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 NDUFB6O95139 128 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 IGKV2D-40P01614 121 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-212ENST00000498540 MBPP02686 304 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-212ENST00000498540 CRYGDP07320 174 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 SRIP30626 198 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 EXOC3-AS1Q8N2X6 119 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 OR1L4Q8NGR5 311 aa9.88□□□□□ -0.83
TRAF4-212ENST00000498540 MRPL32Q9BYC8 188 aaKnown RBP9.88□□□□□ -0.83
TRAF4-212ENST00000498540 TRGV4A0A0C4DH28 118 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 PYYP10082 97 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 GYPEP15421 78 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 RAB31Q13636 194 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 C9orf47Q6ZRZ4 202 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 ZNF479Q96JC4 524 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 PFDN5Q99471 154 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 ARPC5LQ9BPX5 153 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 FAM30AQ9NZY2 134 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 PRELID1Q9Y255 219 aa9.87□□□□□ -0.83
TRAF4-212ENST00000498540 NOL3O60936 208 aaKnown RBP9.86□□□□□ -0.83
TRAF4-212ENST00000498540 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
TRAF4-212ENST00000498540 NTN5Q8WTR8 489 aaPredicted RBP9.86□□□□□ -0.83
TRAF4-212ENST00000498540 BLNKQ8WV28 456 aa9.86□□□□□ -0.83
TRAF4-212ENST00000498540 SLC39A9Q9NUM3 307 aa9.86□□□□□ -0.83
TRAF4-212ENST00000498540 TMEM14CQ9P0S9 112 aa9.86□□□□□ -0.83
TRAF4-212ENST00000498540 WDR83OSQ9Y284 106 aa9.86□□□□□ -0.83
TRAF4-212ENST00000498540 TIMM9Q9Y5J7 89 aa9.86□□□□□ -0.83
TRAF4-212ENST00000498540 CST7O76096 145 aa9.85□□□□□ -0.83
TRAF4-212ENST00000498540 NMBP08949 121 aa9.85□□□□□ -0.83
TRAF4-212ENST00000498540 HIST1H1EP10412 219 aaKnown RBP9.85□□□□□ -0.83
TRAF4-212ENST00000498540 PDE6HQ13956 83 aa9.85□□□□□ -0.83
TRAF4-212ENST00000498540 TMEM78Q5T7P6 136 aa9.85□□□□□ -0.83
TRAF4-212ENST00000498540 C10orf126Q8N4M7 172 aa9.85□□□□□ -0.83
TRAF4-212ENST00000498540 PCNPQ8WW12 178 aaKnown RBP9.85□□□□□ -0.83
TRAF4-212ENST00000498540 SRRQ9GZT4 340 aa9.85□□□□□ -0.83
TRAF4-212ENST00000498540 UQCC1Q9NVA1 299 aa9.85□□□□□ -0.83
TRAF4-212ENST00000498540 UBE2L5PA0A1B0GUS4 154 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 L7N2F9 121 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 CCSO14618 274 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 PSCAO43653 123 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 RPL29P47914 159 aaKnown RBP9.84□□□□□ -0.83
TRAF4-212ENST00000498540 BCAP31P51572 246 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 CAV2P51636 162 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 VAMP2P63027 116 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 MUC21Q5SSG8 566 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 FAM122CQ6P4D5 195 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 IQCF2Q8IXL9 164 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 C12orf45Q8N5I9 185 aaPredicted RBP9.84□□□□□ -0.83
TRAF4-212ENST00000498540 Q8N814 137 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 OR10G4Q8NGN3 311 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 Q8TAT8 98 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 ZNF492Q9P255 531 aa9.84□□□□□ -0.83
TRAF4-212ENST00000498540 LSM5Q9Y4Y9 91 aaKnown RBP9.84□□□□□ -0.83
TRAF4-212ENST00000498540 LOC100131303A0A0U1RQF7 123 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 NAP1L6A6NFF2 107 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 FAM24AA6NFZ4 105 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 ORM1P02763 201 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 BTCP35070 178 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 BAXQ07812 192 aa9.83□□□□□ -0.84
TRAF4-212ENST00000498540 VWC2Q2TAL6 325 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms