RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 OR4C12Q96R67 309 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 TM2D3Q9BRN9 247 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 SLC25A22Q9H936 323 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 ZNF355PQ9NSJ1 428 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 TMEM56-RWDD3S4R434 201 aa4.25□□□□□ -1.73
TMEM39A-212ENST00000497993 C3orf85A0A1B0GTC6 90 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 CCDC160A6NGH7 325 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 DISC1C4P0D8 188 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 I3L2K1 104 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 CORTO00230 105 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 NDUFA4O00483 81 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 RGS5O15539 181 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 SNAPC5O75971 98 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 KRASP01116 189 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 IGHV3-48P01763 117 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 PRH1P02810 166 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 OR13C7P0DN81 318 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 SLC25A6P12236 298 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 SYNJ2BPP57105 145 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 RAB25P57735 213 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 RANP62826 216 aaKnown RBP4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 DEFA5Q01523 94 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 NMSQ5H8A3 153 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 OR11H7Q8NGC8 314 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 BLNKQ8WV28 456 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 C6orf62Q9GZU0 229 aaPredicted RBP4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 Q9H3A6 140 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 NAA60Q9H7X0 242 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 SCP2D1Q9UJQ7 156 aa4.24□□□□□ -1.73
TMEM39A-212ENST00000497993 DYNC2H1Q8NCM8 4307 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 KMT2CQ8NEZ4 4911 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 H0Y9J4 135 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 PITX3O75364 302 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 APELAP0DMC3 54 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 RNASE2P10153 161 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 TSPOP30536 169 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 FAUP35544 74 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 SULT1A1P50225 295 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 SULT1A2P50226 295 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 CACNG7P62955 275 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 C4orf26Q17RF5 130 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 DEFB114Q30KQ6 69 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 ZFP69Q49AA0 526 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 FAAP20Q6NZ36 180 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 FAM231DQ6ZW35 169 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 TMED4Q7Z7H5 227 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 NIT1Q86X76 327 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 GATD1Q8NB37 220 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 OR10G9Q8NGN4 311 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 SLC25A21Q9BQT8 299 aaPredicted RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 MS4A6AQ9H2W1 248 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 DAZ1Q9NQZ3 744 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 C21orf62Q9NYP8 219 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 MRPL27Q9P0M9 148 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 COPZ2Q9P299 210 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 CACNG5Q9UF02 275 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 C14orf166Q9Y224 244 aaKnown RBP4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 LYSTQ99698 3801 aa4.23□□□□□ -1.73
TMEM39A-212ENST00000497993 TRAV2A0A0B4J234 112 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 TRAV8-6A0A0B4J262 113 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 PPP5D1E7EU14 171 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 CD5P06127 495 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 CTSGP08311 255 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 OR5AC1P0C628 307 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 DEFA4P12838 97 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 FOLR2P14207 255 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 CBLN1P23435 193 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 RPL12P30050 165 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 PSMB2P49721 201 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 AKR1C2P52895 323 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 FGF8P55075 233 aaPredicted RBP4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 NANOS2P60321 138 aaKnown RBP4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 SPCS3P61009 180 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 C2orf83Q53S99 150 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 TMEM128Q5BJH2 165 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 CLEC19AQ6UXS0 136 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 UNQ9165/PRO28630Q6UXU0 137 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 LGI3Q8N145 548 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 OR2D3Q8NGH3 330 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 S100ZQ8WXG8 99 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 RNF185Q96GF1 192 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 METTL26Q96S19 204 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 DHRS4-AS1Q9P1J3 65 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 UFC1Q9Y3C8 167 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 U3KQK5 164 aa4.22□□□□□ -1.73
TMEM39A-212ENST00000497993 IGLV8-61A0A075B6I0 122 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 IZUMO1RA6ND01 250 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 NAP1L6A6NFF2 107 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 SOCS3O14543 225 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 REG1AP05451 166 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 AKR1C4P17516 323 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 TCL1AP56279 114 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 ERHP84090 104 aaKnown RBP4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 SCGB2B2Q4G0G5 96 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 PLET1Q6UQ28 207 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 SBSPONQ8IVN8 264 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 SGPP2Q8IWX5 399 aa4.21□□□□□ -1.74
TMEM39A-212ENST00000497993 TMEM61Q8N0U2 210 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms