RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 OR1I1O60431 355 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 DPM2O94777 84 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 UCHL1P09936 223 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 CCL4P13236 92 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 MUC1P15941 1255 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-224ENST00000497488 MDKP21741 143 aaPredicted RBP3.76□□□□□ -1.81
BRCA1-224ENST00000497488 MT3P25713 68 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 UBE2BP63146 152 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 ZNF141Q15928 474 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 C2orf91Q6ZV80 131 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 MIR17HGQ75NE6 70 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 MAGOHBQ96A72 148 aaKnown RBP3.76□□□□□ -1.81
BRCA1-224ENST00000497488 OSTCQ9NRP0 149 aa3.76□□□□□ -1.81
BRCA1-224ENST00000497488 RBM7Q9Y580 266 aaKnown RBP3.76□□□□□ -1.81
BRCA1-224ENST00000497488 AGRNO00468 2067 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 KMT2BQ9UMN6 2715 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-224ENST00000497488 RNASE4P34096 147 aaKnown RBP3.75□□□□□ -1.81
BRCA1-224ENST00000497488 XCL1P47992 114 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 GNG11P61952 73 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 RRAS2P62070 204 aaPredicted RBP3.75□□□□□ -1.81
BRCA1-224ENST00000497488 MSMO1Q15800 293 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 VMA21Q3ZAQ7 101 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 HIST3H2BBQ8N257 126 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 OR10P1Q8NGE3 313 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 OR4K15Q8NH41 348 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 MRPL32Q9BYC8 188 aaKnown RBP3.75□□□□□ -1.81
BRCA1-224ENST00000497488 USP24Q9UPU5 2620 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 LAMA5O15230 3695 aa3.75□□□□□ -1.81
BRCA1-224ENST00000497488 ASXL3Q9C0F0 2248 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 IGHV3OR16-8A0A075B7F1 116 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 M0R2Z0 102 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 CST7O76096 145 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 CXCL1P09341 107 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 S100PP25815 95 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 SDC2P34741 201 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 RP1P56715 2156 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 LGALSLQ3ZCW2 172 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-224ENST00000497488 LINC00483Q53H64 154 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 C2orf83Q53S99 150 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 ZNF695Q8IW36 515 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 IFT20Q8IY31 132 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 SLC30A7Q8NEW0 376 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 YPEL2Q96QA6 119 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 MIEN1Q9BRT3 115 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 NAT8Q9UHE5 227 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 ERG28Q9UKR5 140 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 CHD8Q9HCK8 2581 aa3.74□□□□□ -1.81
BRCA1-224ENST00000497488 IGF2RP11717 2491 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 MAP1BP46821 2468 aaKnown RBP3.73□□□□□ -1.81
BRCA1-224ENST00000497488 CEP295Q9C0D2 2601 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 A0A0J9YW62 118 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 LOC107984640A0A0U1RRK4 108 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 A0A1W2PQD3 144 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 C7orf66A4D0T2 115 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 CD24P25063 80 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 PEBP1P30086 187 aaKnown RBP3.73□□□□□ -1.81
BRCA1-224ENST00000497488 DYNLT3P51808 116 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 RHOGP84095 191 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 ZNF117Q03924 483 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 C4orf22Q6V702 233 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 MSRB3Q8IXL7 192 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 OR4E2Q8NGC2 313 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 SCGB3A1Q96QR1 104 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 HIST1H2BLQ99880 126 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 PRADC1Q9BSG0 188 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 ASF1BQ9NVP2 202 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 NBEAQ8NFP9 2946 aa3.73□□□□□ -1.81
BRCA1-224ENST00000497488 ZFC3H1O60293 1989 aaKnown RBP3.72□□□□□ -1.81
BRCA1-224ENST00000497488 ACACBO00763 2458 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 IGHV1-58A0A0C4DH39 117 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 TRBV7-6A0A0J9YX20 115 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 MEIS3P1A6NDR6 274 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 ATP6V1G2-DDX39BF2Z307 99 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 LY6LH3BQJ8 138 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 NAPSAO96009 420 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 PRB1P04280 392 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 GZMBP10144 247 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 TMBIM6P55061 237 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 NDUFA6P56556 154 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 BIKQ13323 160 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 CCSMST1Q4G0I0 132 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 GLYATL3Q5SZD4 288 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 NOXRED1Q6NXP6 359 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 PHF5AQ7RTV0 110 aaKnown RBP3.72□□□□□ -1.81
BRCA1-224ENST00000497488 LYG1Q8N1E2 194 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 C1orf64Q8NEQ6 169 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 OR51A4Q8NGJ6 313 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 IMMP2LQ96T52 175 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 GGACTQ9BVM4 153 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 LPAR5Q9H1C0 372 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 OR5AC2Q9NZP5 309 aa3.72□□□□□ -1.81
BRCA1-224ENST00000497488 ITPR1Q14643 2758 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 H3BT86 120 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 MT-ND4LP03901 98 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 FABP2P12104 132 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 HOXB6P17509 224 aaKnown RBP3.71□□□□□ -1.82
BRCA1-224ENST00000497488 NCS1P62166 190 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 SELENOWP63302 87 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 DEFB110Q30KQ9 67 aa3.71□□□□□ -1.82
BRCA1-224ENST00000497488 KPRPQ5T749 579 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms