RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 LINC01587Q99440 93 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 NDUFAF3Q9BU61 184 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 PAXXQ9BUH6 204 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 RBAKDNA6NC62 111 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 IFNA5P01569 189 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 M6PRP20645 277 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 DAZ2Q13117 558 aaKnown RBP7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 ICAM4Q14773 271 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 POM121L12Q8N7R1 296 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 PHYHIPLQ96FC7 376 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 PYGO2Q9BRQ0 406 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 MED28Q9H204 178 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 ZNF492Q9P255 531 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 TIMM8BQ9Y5J9 83 aaPredicted RBP7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 LRP1BQ9NZR2 4599 aa7.67□□□□□ -1.18
SHROOM3-210ENST00000497440 MUC4Q99102 2169 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 RNF222A6NCQ9 220 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 P0DMU3 169 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 FAM231AP0DMU4 169 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 FAM231CP0DMU5 169 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 LEPP41159 167 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 DAD1P61803 113 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 ANXA2RQ3ZCQ2 193 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 RNF212Q495C1 297 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 FFAR4Q5NUL3 377 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 C11orf72Q8NBR9 251 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 SCGB1C1Q8TD33 95 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 TMED6Q8WW62 240 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 VGLL1Q99990 258 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 PSMG3Q9BT73 122 aaPredicted RBP7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 SMIM3Q9BZL3 60 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 TP53TG3Q9ULZ0 132 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 NACAE9PAV3 2078 aa7.66□□□□□ -1.18
SHROOM3-210ENST00000497440 DNAH5Q8TE73 4624 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 OR10J4P0C629 311 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 SERF2P84101 59 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 CD300CQ08708 224 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 ERCC8Q13216 396 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 PQLC2Q6ZP29 291 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 BLNKQ8WV28 456 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 LENEPQ9Y5L5 61 aa7.65□□□□□ -1.18
SHROOM3-210ENST00000497440 TRAV12-3A0A0B4J271 114 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 C7orf71A4D174 169 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 DIRC3C9JPN6 131 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 STAG3L2P0CL84 134 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 STAG3L3P0CL85 134 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 ZNF138P52744 262 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 TAS2R45P59539 299 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 RANP62826 216 aaKnown RBP7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 ZNF266Q14584 549 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 PRR9Q5T870 116 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 TMEM88Q6PEY1 159 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 Q6ZR54 194 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 C15orf53Q8NAA6 179 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 TNFSF18Q9UNG2 199 aa7.64□□□□□ -1.19
SHROOM3-210ENST00000497440 IGKV2-40A0A087WW87 121 aaPredicted RBP7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 OR7C2O60412 319 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 IGKV2D-40P01614 121 aaPredicted RBP7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 ATP5G1P05496 136 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 ATP6V0CP27449 155 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 ATP5G3P48201 142 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 RAB2AP61019 212 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 RGS21Q2M5E4 152 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 LGALS9BQ3B8N2 356 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 ACOT6Q3I5F7 207 aaPredicted RBP7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 KHDC3LQ587J8 217 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 IBA57Q5T440 356 aaKnown RBP7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 RXFP4Q8TDU9 374 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 Q9H3A6 140 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 NOP10Q9NPE3 64 aaKnown RBP7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 OTORQ9NRC9 128 aa7.63□□□□□ -1.19
SHROOM3-210ENST00000497440 H3BNG1 76 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 DEFB130BP0DP73 79 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 DEFB130AP0DP74 79 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 FAM3BP58499 235 aaPredicted RBP7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 UBE2L3P68036 154 aaKnown RBP7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 BTN1A1Q13410 526 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 TDRG1Q3Y452 100 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 TMEM78Q5T7P6 136 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 Q6AWC8 147 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 FAM122CQ6P4D5 195 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 Q6ZQT7 251 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 CCDC28AQ8IWP9 274 aa7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 EIF4E3Q8N5X7 224 aaKnown RBP7.62□□□□□ -1.19
SHROOM3-210ENST00000497440 SPINK4O60575 86 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 EIF3GO75821 320 aaKnown RBP eCLIP7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 GPX1P07203 203 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 TCL1AP56279 114 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 ZNF680Q8NEM1 530 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 OR10G4Q8NGN3 311 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 OR10G9Q8NGN4 311 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 OR10G7Q8NGN6 311 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 OR2T35Q8NGX2 323 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 RAB24Q969Q5 203 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 TVP23CQ96ET8 276 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 CYTL1Q9NRR1 136 aa7.61□□□□□ -1.19
SHROOM3-210ENST00000497440 RYR1P21817 5038 aa7.6□□□□□ -1.19
SHROOM3-210ENST00000497440 IGHV1OR15-1A0A075B7D0 117 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms