RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 ZFAND6Q6FIF0 208 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
HMGCL-206ENST00000496907 APRG1Q8IVJ8 170 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 OR8A1Q8NGG7 326 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 SFT2D1Q8WV19 159 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 BLNKQ8WV28 456 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 TMED6Q8WW62 240 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 RPUSD4Q96CM3 377 aaKnown RBP4.49□□□□□ -1.69
HMGCL-206ENST00000496907 FXYD5Q96DB9 178 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 ODF3Q96PU9 254 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 C20orf144Q9BQM9 153 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 SH3BGRL3Q9H299 93 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 LENEPQ9Y5L5 61 aa4.49□□□□□ -1.69
HMGCL-206ENST00000496907 TRAV8-2A0A0B4J237 113 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 MAP1LC3B2A6NCE7 125 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 PGPA6NDG6 321 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 SMIM9A6NGZ8 99 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 A8MTW9 85 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 SPRY2O43597 315 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 IFNA1P01562 189 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 IFNA7P01567 189 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 S100A9P06702 114 aaKnown RBP4.48□□□□□ -1.69
HMGCL-206ENST00000496907 OR10J4P0C629 311 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 ARL14EPLP0DKL9 152 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 PYYP10082 97 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 LEPP41159 167 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 HAGHQ16775 308 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 TMEM78Q5T7P6 136 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 MORN5Q5VZ52 161 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 C9orf47Q6ZRZ4 202 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 TMEM256Q8N2U0 113 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 C5orf17Q8NAS9 161 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 OR4B1Q8NGF8 309 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 IL17DQ8TAD2 202 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 FAM213BQ8TBF2 198 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 HIST1H2BAQ96A08 127 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 RCHY1Q96PM5 261 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 TM2D3Q9BRN9 247 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 MAP1LC3BQ9GZQ8 125 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 Q9H3A6 140 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 GOLT1BQ9Y3E0 138 aa4.48□□□□□ -1.69
HMGCL-206ENST00000496907 ZNF705EA8MWA4 302 aaPredicted RBP4.47□□□□□ -1.69
HMGCL-206ENST00000496907 NDUFS6O75380 124 aaKnown RBP4.47□□□□□ -1.69
HMGCL-206ENST00000496907 NDUFB4O95168 129 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 RPL35AP18077 110 aaKnown RBP4.47□□□□□ -1.69
HMGCL-206ENST00000496907 CDKN1BP46527 198 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 CNN1P51911 297 aaKnown RBP4.47□□□□□ -1.69
HMGCL-206ENST00000496907 SUMO1P63165 101 aaKnown RBP4.47□□□□□ -1.69
HMGCL-206ENST00000496907 HIST1H1AQ02539 215 aaPredicted RBP4.47□□□□□ -1.69
HMGCL-206ENST00000496907 SAPCD1Q5SSQ6 148 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 IQCF2Q8IXL9 164 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 FAM24BQ8N5W8 94 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 RNF183Q96D59 192 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 ZNF503Q96F45 646 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 C17orf77Q96MU5 243 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 NDFIP1Q9BT67 221 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 MANBALQ9NQG1 85 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 SELENOKQ9Y6D0 94 aa4.47□□□□□ -1.69
HMGCL-206ENST00000496907 HECTD4Q9Y4D8 3996 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 TMEM189A5PLL7 270 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 KNCNA6PVL3 124 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 DIRC3C9JPN6 131 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 NPIPB6E9PJ23 425 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 BOLA2-SMG1P6H3BVE0 249 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 CA1P00915 261 aaPredicted RBP4.46□□□□□ -1.7
HMGCL-206ENST00000496907 MIFP14174 115 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 ZNF138P52744 262 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 RAB14P61106 215 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 SBSPONQ8IVN8 264 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 EXOC3-AS1Q8N2X6 119 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 RNF182Q8N6D2 247 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 C20orf173Q96LM9 149 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 IGF2BP2-AS1Q96M15 143 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 NEU1Q99519 415 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 RARRES2Q99969 163 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 EPDR1Q9UM22 224 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 STARD9Q9P2P6 4700 aa4.46□□□□□ -1.7
HMGCL-206ENST00000496907 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
HMGCL-206ENST00000496907 TEX48A0A1B0GUV7 120 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 FAM74A7A6NL05 159 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 H7BYZ3 331 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 SLC17A3O00476 420 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 PDE6DO43924 150 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 INSP01308 110 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 CRISP2P16562 243 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 ZNF726P1Q15940 193 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 CST9LP1Q5W188 147 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 TEX261Q6UWH6 196 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 ZNF493Q6ZR52 646 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 CCDC28AQ8IWP9 274 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 CYB561D1Q8N8Q1 229 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 NIPSNAP3BQ9BS92 247 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 ATG101Q9BSB4 218 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 TMEM208Q9BTX3 173 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 SMDT1Q9H4I9 107 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 ZNF492Q9P255 531 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 ZFP30Q9Y2G7 519 aa4.45□□□□□ -1.7
HMGCL-206ENST00000496907 PLECQ15149 4684 aaKnown RBP4.45□□□□□ -1.7
HMGCL-206ENST00000496907 TRBV6-1A0A0K0K1D8 114 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms