RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ATP5SQ99766 215 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 PRADC1Q9BSG0 188 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 MANBALQ9NQG1 85 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 RPRMQ9NS64 109 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 TET2Q6N021 2002 aaPredicted RBP4.88□□□□□ -1.63
SSBP1-213ENST00000496622 KBTBD11O94819 623 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 PFN1P07737 140 aaKnown RBP4.88□□□□□ -1.63
SSBP1-213ENST00000496622 SEC11BP0C7V7 166 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 HTR1DP28221 377 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 INSL3P51460 131 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 KHDC1LQ5JSQ8 128 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 TMEM14EPQ6UXP3 125 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 CYB561D1Q8N8Q1 229 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 ZNRF2Q8NHG8 242 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 VSTM2AQ8TAG5 236 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 SMDT1Q9H4I9 107 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 IGHV3OR16-10A0A075B7F0 116 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 ISLRO14498 428 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 NPFFO15130 113 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 SRP19P09132 144 aaKnown RBP4.87□□□□□ -1.63
SSBP1-213ENST00000496622 IGLC6P0CF74 106 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 ZNF726P1Q15940 193 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 ZNF833PQ6ZTB9 187 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 DTX2Q86UW9 622 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 OR10P1Q8NGE3 313 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 OR8B3Q8NGG8 313 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 TIMD4Q96H15 378 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 OR8B2Q96RD0 313 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 NABP2Q9BQ15 211 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 FAM236DA0A1B0GTK5 79 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 A0A1B0GX51 115 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 FCN1O00602 326 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 FAM236CP0DP71 79 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 MRPL54Q6P161 138 aaKnown RBP4.87□□□□□ -1.63
SSBP1-213ENST00000496622 SH2D6Q7Z4S9 175 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 RPP25LQ8N5L8 163 aaKnown RBP4.87□□□□□ -1.63
SSBP1-213ENST00000496622 ZNF114Q8NC26 417 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 MAPK1IP1LQ8NDC0 245 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 OR9G1Q8NH87 305 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 LINC01587Q99440 93 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 SSBP3Q9BWW4 388 aaPredicted RBP4.87□□□□□ -1.63
SSBP1-213ENST00000496622 SAMD10Q9BYL1 202 aa4.87□□□□□ -1.63
SSBP1-213ENST00000496622 A6NDN8 102 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 C15orf61A6NNL5 157 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 RHODO00212 210 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 ATP5LO75964 103 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 CA2P00918 260 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 OXTP01178 125 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 IGLV1-47P01700 117 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 IGHV4-39P01824 125 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 IER3P46695 156 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 HBG1P69891 147 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 HBG2P69892 147 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 RTL8BQ17RB0 113 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 CLEC12BQ2HXU8 276 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 HLA-DRB5Q30154 266 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 HCP5Q6MZN7 132 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 DYNAPQ8N1N2 210 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 SCGB1C1Q8TD33 95 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 SSMEM1Q8WWF3 244 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 TAF15Q92804 592 aaKnown RBP eCLIP4.86□□□□□ -1.63
SSBP1-213ENST00000496622 CCDC140Q96MF4 163 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 FAM103A1Q9BTL3 118 aaKnown RBP4.86□□□□□ -1.63
SSBP1-213ENST00000496622 SLC25A22Q9H936 323 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 X6R8D5 127 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 TEX50A0A1B0GTY4 177 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 RBFOX3A6NFN3 312 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 ZFP92A6NM28 416 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 BUB1B-PAK6H3BSN5 160 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 GNB1P62873 340 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 WFDC2Q14508 124 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 ETDBQ3ZM63 59 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 LINC01620Q4KN68 170 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 FAM19A1Q7Z5A9 133 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 PPP1R27Q86WC6 154 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 Q8N1Y9 231 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 CARD19Q96LW7 228 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 SLC25A39Q9BZJ4 359 aaPredicted RBP4.86□□□□□ -1.63
SSBP1-213ENST00000496622 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 TMEM14BQ9NUH8 114 aa4.86□□□□□ -1.63
SSBP1-213ENST00000496622 IGKV1OR2-108A0A075B7D4 117 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 IGHV1-3A0A0C4DH29 117 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 A0A1W2PPM0 123 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 FAM90A26D6RGX4 464 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 H3BRM9 83 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 TIMM23O14925 209 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 SERF1AO75920 110 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 IGLV2-23P01705 113 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 IFITM1P13164 125 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 IGLL1P15814 213 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 KRTAP10-9P60411 292 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 HSPE1P61604 102 aaKnown RBP4.85□□□□□ -1.63
SSBP1-213ENST00000496622 WT1-ASQ06250 92 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 TTC32Q5I0X7 151 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 DGAT2L7PQ6IED9 249 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 SPATA12Q7Z6I5 190 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms