RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 Q6ZQT7 251 aa12.48□□□□□ -0.41
RHBDD3-207ENST00000496342 TMEM256Q8N2U0 113 aa12.48□□□□□ -0.41
RHBDD3-207ENST00000496342 INO80EQ8NBZ0 244 aaPredicted RBP12.48□□□□□ -0.41
RHBDD3-207ENST00000496342 ODF3Q96PU9 254 aa12.48□□□□□ -0.41
RHBDD3-207ENST00000496342 A0A1W2PPV4 95 aa12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 ARPC5O15511 151 aa12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 CDC34P49427 236 aaPredicted RBP12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 CD300CQ08708 224 aa12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 SSX7Q7RTT5 188 aa12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 OR2G3Q8NGZ4 309 aa12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 FAM19A4Q96LR4 140 aa12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 PSMG3Q9BT73 122 aaPredicted RBP12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 RPH3ALQ9UNE2 315 aa12.47□□□□□ -0.41
RHBDD3-207ENST00000496342 H7BYZ3 331 aa12.46□□□□□ -0.41
RHBDD3-207ENST00000496342 ARL14EPLP0DKL9 152 aa12.46□□□□□ -0.41
RHBDD3-207ENST00000496342 DAD1P61803 113 aa12.46□□□□□ -0.41
RHBDD3-207ENST00000496342 C9orf47Q6ZRZ4 202 aa12.46□□□□□ -0.41
RHBDD3-207ENST00000496342 RNASE8Q8TDE3 154 aaKnown RBP12.46□□□□□ -0.41
RHBDD3-207ENST00000496342 HYLS1Q96M11 299 aa12.46□□□□□ -0.41
RHBDD3-207ENST00000496342 C7orf71A4D174 169 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 KLLNB2CW77 178 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 LINC00477Q96M19 166 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 C20orf144Q9BQM9 153 aa12.45□□□□□ -0.42
RHBDD3-207ENST00000496342 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 GNG5P63218 68 aa12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 TMEM78Q5T7P6 136 aa12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 PQLC2Q6ZP29 291 aa12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 ZFAND2AQ8N6M9 145 aa12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 TMEM263Q8WUH6 116 aaKnown RBP12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 RAB24Q969Q5 203 aa12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 NOP10Q9NPE3 64 aaKnown RBP12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 ZNF492Q9P255 531 aa12.44□□□□□ -0.42
RHBDD3-207ENST00000496342 PGPA6NDG6 321 aa12.43□□□□□ -0.42
RHBDD3-207ENST00000496342 DIRC3C9JPN6 131 aa12.43□□□□□ -0.42
RHBDD3-207ENST00000496342 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
RHBDD3-207ENST00000496342 STAG3L2P0CL84 134 aa12.43□□□□□ -0.42
RHBDD3-207ENST00000496342 STAG3L3P0CL85 134 aa12.43□□□□□ -0.42
RHBDD3-207ENST00000496342 OR11H4Q8NGC9 324 aa12.43□□□□□ -0.42
RHBDD3-207ENST00000496342 BORCS7-ASMTA0A0B4J1R7 106 aa12.42□□□□□ -0.42
RHBDD3-207ENST00000496342 LYRM9A8MSI8 78 aa12.42□□□□□ -0.42
RHBDD3-207ENST00000496342 CRISP2P16562 243 aa12.42□□□□□ -0.42
RHBDD3-207ENST00000496342 CSN1S1P47710 185 aa12.42□□□□□ -0.42
RHBDD3-207ENST00000496342 LYPD1Q8N2G4 141 aa12.42□□□□□ -0.42
RHBDD3-207ENST00000496342 OTORQ9NRC9 128 aa12.42□□□□□ -0.42
RHBDD3-207ENST00000496342 CYTL1Q9NRR1 136 aa12.42□□□□□ -0.42
RHBDD3-207ENST00000496342 ZNF324O75467 553 aaPredicted RBP12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 GPX1P07203 203 aa12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 GCHFRP30047 84 aa12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 ZNF138P52744 262 aa12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 TCTAP57738 103 aa12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 SERF2P84101 59 aa12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 ZNF726P1Q15940 193 aa12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
RHBDD3-207ENST00000496342 TMEM88Q6PEY1 159 aa12.4□□□□□ -0.42
RHBDD3-207ENST00000496342 GOLT1AQ6ZVE7 132 aa12.4□□□□□ -0.42
RHBDD3-207ENST00000496342 PYGO2Q9BRQ0 406 aa12.4□□□□□ -0.42
RHBDD3-207ENST00000496342 NDUFAF3Q9BU61 184 aa12.4□□□□□ -0.42
RHBDD3-207ENST00000496342 TP53TG3Q9ULZ0 132 aa12.4□□□□□ -0.42
RHBDD3-207ENST00000496342 TIMM8BQ9Y5J9 83 aaPredicted RBP12.4□□□□□ -0.42
RHBDD3-207ENST00000496342 KMT2AQ03164 3969 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 VPS13DQ5THJ4 4388 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 TRAV8-1A0A0A6YYK1 113 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 ZNF493Q6ZR52 646 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 CCDC28AQ8IWP9 274 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 IQCF2Q8IXL9 164 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 CMTM2Q8TAZ6 248 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 GNPNAT1Q96EK6 184 aaPredicted RBP12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 SGK494Q96LW2 274 aa12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 ACTR3CQ9C0K3 210 aaPredicted RBP12.39□□□□□ -0.43
RHBDD3-207ENST00000496342 RBAKDNA6NC62 111 aa12.38□□□□□ -0.43
RHBDD3-207ENST00000496342 MBP02144 154 aa12.38□□□□□ -0.43
RHBDD3-207ENST00000496342 C11orf72Q8NBR9 251 aa12.38□□□□□ -0.43
RHBDD3-207ENST00000496342 TMPRSS5Q9H3S3 457 aa12.38□□□□□ -0.43
RHBDD3-207ENST00000496342 GSN-AS1Q9NRJ2 163 aa12.38□□□□□ -0.43
RHBDD3-207ENST00000496342 GAGE12BA1L429 117 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 CBY3A6NI87 242 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 SNURFLB1AK76 121 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 F5H768 121 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 F6UZH7 168 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 GAGE7O76087 117 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 FGF8P55075 233 aaPredicted RBP12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 MUC21Q5SSG8 566 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 RXFP4Q8TDU9 374 aa12.37□□□□□ -0.43
RHBDD3-207ENST00000496342 GGTLC3B5MD39 225 aa12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 RGS13O14921 159 aa12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 CXorf1O96002 111 aa12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 FAM74A1Q5RGS3 127 aa12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 Q6ZTI0 123 aa12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 KCNRGQ8N5I3 272 aa12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 EIF4E3Q8N5X7 224 aaKnown RBP12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 LINC00612Q8N6U2 182 aa12.36□□□□□ -0.43
RHBDD3-207ENST00000496342 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms