RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 C17orf112F2Z3M2 114 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 GGCTO75223 188 aaKnown RBP4.66□□□□□ -1.66
VIM-207ENST00000495528 MPDU1O75352 247 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 IGKV1-17P01599 117 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 LINC00869P0C866 280 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 IGLC1P0CG04 106 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 ATP6V0CP27449 155 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 FCGR2BP31994 310 aaPredicted RBP4.66□□□□□ -1.66
VIM-207ENST00000495528 YPEL3P61236 119 aaPredicted RBP4.66□□□□□ -1.66
VIM-207ENST00000495528 ZNF266Q14584 549 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 FAM106AQ4KMX7 169 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 MIC13Q5XKP0 118 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 SLC51BQ86UW2 128 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 GPHB5Q86YW7 130 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 BAP18Q8IXM2 172 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 BPIFCQ8NFQ6 507 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 OR2G3Q8NGZ4 309 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 TRGV9Q99603 122 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 GINS3Q9BRX5 216 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 RSG1Q9BU20 258 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 C20orf24Q9BUV8 137 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 SH3BGRL3Q9H299 93 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 MLXQ9UH92 298 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 PXMP4Q9Y6I8 212 aa4.66□□□□□ -1.66
VIM-207ENST00000495528 KRTAP16-1A8MUX0 517 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 ZNF207O43670 478 aaKnown RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 SCGB2A1O75556 95 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 CFDP00746 253 aaPredicted RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 FABP1P07148 127 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 OR5G3P0C626 314 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 TPT1P13693 172 aaKnown RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 ORM2P19652 201 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 BMI1P35226 326 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 RPL29P47914 159 aaKnown RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 SELENOTP62341 195 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 EIF5AP63241 154 aaKnown RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 LGALS9CQ6DKI2 356 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 TOMM20LQ6UXN7 152 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 PATE2Q6UY27 113 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 ZNF600Q6ZNG1 722 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 Q6ZRG5 221 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 OR51G1Q8NGK1 321 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 GNPNAT1Q96EK6 184 aaPredicted RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 ATP6V0BQ99437 205 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 PBDC1Q9BVG4 233 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 NPCDR1Q9BY65 106 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 PARD6GQ9BYG4 376 aaPredicted RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 ARV1Q9H2C2 271 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 SLC39A9Q9NUM3 307 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 DOK5Q9P104 306 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 UBQLN2Q9UHD9 624 aa4.65□□□□□ -1.67
VIM-207ENST00000495528 KLK5Q9Y337 293 aaPredicted RBP4.65□□□□□ -1.67
VIM-207ENST00000495528 PUS1Q9Y606 427 aaKnown RBP eCLIP4.65□□□□□ -1.67
VIM-207ENST00000495528 RYR1P21817 5038 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 IGHV3-49A0A0A0MS15 119 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 HYPMO75409 117 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 IL4P05112 153 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 C8orf88P0DMB2 117 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 NPPCP23582 126 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 LYZP61626 148 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 B2MP61769 119 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 DEFB135Q30KP9 77 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 GCSAMLQ5JQS6 135 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 PET117Q6UWS5 81 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 UNQ9165/PRO28630Q6UXU0 137 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 OR1B1Q8NGR6 318 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 ZNF414Q96IQ9 312 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 VSIRQ9H7M9 311 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 TP53TG1Q9Y2A0 90 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 TIMM9Q9Y5J7 89 aa4.64□□□□□ -1.67
VIM-207ENST00000495528 IGHV3OR16-13A0A075B7E8 117 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 IGHV3-74A0A0B4J1X5 117 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 TRAV5A0A0B4J249 113 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 TRAV25A0A0B4J276 109 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 IGHV3-66A0A0C4DH42 116 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 A0A1W2PPV4 95 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 A8MWP6 167 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 NDUFA4O00483 81 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 COX7A2P2O60397 106 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 EIF3GO75821 320 aaKnown RBP eCLIP4.63□□□□□ -1.67
VIM-207ENST00000495528 SEC11BP0C7V7 166 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 APOC4P55056 127 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 RAB2AP61019 212 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 SERF2P84101 59 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 ACOT6Q3I5F7 207 aaPredicted RBP4.63□□□□□ -1.67
VIM-207ENST00000495528 AKR1C8PQ5T2L2 129 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 C10orf113Q5VZT2 155 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 EIF5AL1Q6IS14 154 aaKnown RBP4.63□□□□□ -1.67
VIM-207ENST00000495528 ALKAL2Q6UX46 152 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 OR10G4Q8NGN3 311 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 OR10G9Q8NGN4 311 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 OR10G7Q8NGN6 311 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 OR1L4Q8NGR5 311 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 STOML3Q8TAV4 291 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 C11orf45Q8TAV5 145 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 TMEM37Q8WXS4 190 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 PSMG3Q9BT73 122 aaPredicted RBP4.63□□□□□ -1.67
VIM-207ENST00000495528 RPRMQ9NS64 109 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 MRPL27Q9P0M9 148 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms