RNA–Protein interactions for RNA: ENST00000495423.1

SIMC1-208, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 2

Gene SIMC1, Length 913 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-208ENST00000495423 HLA-DRB4P13762 266 aa16.48■□□□□ 0.23
SIMC1-208ENST00000495423 FAM210BQ96KR6 192 aa16.48■□□□□ 0.23
SIMC1-208ENST00000495423 NEU1Q99519 415 aa16.48■□□□□ 0.23
SIMC1-208ENST00000495423 AAMDCQ9H7C9 122 aa16.48■□□□□ 0.23
SIMC1-208ENST00000495423 TMEM167BQ9NRX6 74 aa16.48■□□□□ 0.23
SIMC1-208ENST00000495423 HLA-DRB4X5D2U9 266 aa16.48■□□□□ 0.23
SIMC1-208ENST00000495423 EBLN2Q6P2I7 272 aa16.47■□□□□ 0.23
SIMC1-208ENST00000495423 ARL6IP6Q8N6S5 226 aa16.47■□□□□ 0.23
SIMC1-208ENST00000495423 XCL2Q9UBD3 114 aa16.47■□□□□ 0.23
SIMC1-208ENST00000495423 IGLV2-18A0A075B6J9 118 aa16.46■□□□□ 0.23
SIMC1-208ENST00000495423 NDUFB4O95168 129 aa16.46■□□□□ 0.23
SIMC1-208ENST00000495423 ARL14EPLP0DKL9 152 aa16.46■□□□□ 0.23
SIMC1-208ENST00000495423 SOHLH1Q5JUK2 328 aa16.46■□□□□ 0.23
SIMC1-208ENST00000495423 ZNF705AQ6ZN79 300 aaPredicted RBP16.46■□□□□ 0.23
SIMC1-208ENST00000495423 UBE2DNLQ8IWF7 75 aa16.46■□□□□ 0.23
SIMC1-208ENST00000495423 TMED6Q8WW62 240 aa16.46■□□□□ 0.23
SIMC1-208ENST00000495423 A8MTW9 85 aa16.45■□□□□ 0.22
SIMC1-208ENST00000495423 H3BMM0 161 aa16.45■□□□□ 0.22
SIMC1-208ENST00000495423 SLC17A3O00476 420 aa16.45■□□□□ 0.22
SIMC1-208ENST00000495423 DUSP14O95147 198 aaKnown RBP16.45■□□□□ 0.22
SIMC1-208ENST00000495423 SPART-AS1P0CW21 52 aa16.45■□□□□ 0.22
SIMC1-208ENST00000495423 C20orf173Q96LM9 149 aa16.45■□□□□ 0.22
SIMC1-208ENST00000495423 A0A0J9YX75 114 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 TMEM189A5PLL7 270 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 ZNF705FA8MVS1 300 aaPredicted RBP16.44■□□□□ 0.22
SIMC1-208ENST00000495423 OR10J4P0C629 311 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 ZNF705DP0CH99 300 aaPredicted RBP16.44■□□□□ 0.22
SIMC1-208ENST00000495423 ZNF705BP0CI00 300 aaPredicted RBP16.44■□□□□ 0.22
SIMC1-208ENST00000495423 GCHFRP30047 84 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 ZNF726P1Q15940 193 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 RNF212Q495C1 297 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 ZNF738Q8NE65 137 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 MBD3L1Q8WWY6 194 aa16.44■□□□□ 0.22
SIMC1-208ENST00000495423 SMIM9A6NGZ8 99 aa16.43■□□□□ 0.22
SIMC1-208ENST00000495423 SULT1A2P50226 295 aa16.43■□□□□ 0.22
SIMC1-208ENST00000495423 RNF182Q8N6D2 247 aa16.43■□□□□ 0.22
SIMC1-208ENST00000495423 BLNKQ8WV28 456 aa16.43■□□□□ 0.22
SIMC1-208ENST00000495423 RPUSD4Q96CM3 377 aaKnown RBP16.43■□□□□ 0.22
SIMC1-208ENST00000495423 FAM74A1Q5RGS3 127 aa16.42■□□□□ 0.22
SIMC1-208ENST00000495423 OR8A1Q8NGG7 326 aa16.42■□□□□ 0.22
SIMC1-208ENST00000495423 OTORQ9NRC9 128 aa16.42■□□□□ 0.22
SIMC1-208ENST00000495423 PLA2G2EQ9NZK7 142 aa16.42■□□□□ 0.22
SIMC1-208ENST00000495423 ARL2-SNX15V9GYD0 113 aa16.42■□□□□ 0.22
SIMC1-208ENST00000495423 MAP1LC3B2A6NCE7 125 aa16.41■□□□□ 0.22
SIMC1-208ENST00000495423 NKX2-5P52952 324 aaPredicted RBP16.41■□□□□ 0.22
SIMC1-208ENST00000495423 C1orf134Q5TEV5 83 aa16.41■□□□□ 0.22
SIMC1-208ENST00000495423 RXFP4Q8TDU9 374 aa16.41■□□□□ 0.22
SIMC1-208ENST00000495423 NKX6-2Q9C056 277 aaPredicted RBP16.41■□□□□ 0.22
SIMC1-208ENST00000495423 MAP1LC3BQ9GZQ8 125 aa16.41■□□□□ 0.22
SIMC1-208ENST00000495423 TRAV1-1A0A0B4J248 108 aa16.4■□□□□ 0.22
SIMC1-208ENST00000495423 TEX48A0A1B0GUV7 120 aa16.4■□□□□ 0.22
SIMC1-208ENST00000495423 H3BTX0 84 aa16.4■□□□□ 0.22
SIMC1-208ENST00000495423 SSX7Q7RTT5 188 aa16.4■□□□□ 0.22
SIMC1-208ENST00000495423 DKK2Q9UBU2 259 aa16.4■□□□□ 0.22
SIMC1-208ENST00000495423 A0A1W2PRE2 83 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 TEX46H3BTG2 121 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 HMGB3O15347 200 aaKnown RBP16.39■□□□□ 0.21
SIMC1-208ENST00000495423 CDK2AP2O75956 126 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 SNRPCP09234 159 aaKnown RBP16.39■□□□□ 0.21
SIMC1-208ENST00000495423 CSN1S1P47710 185 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 RANP62826 216 aaKnown RBP16.39■□□□□ 0.21
SIMC1-208ENST00000495423 IGFL4Q6B9Z1 124 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 OR10J6PQ8NGY7 276 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 FAM213BQ8TBF2 198 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 Q9H3A6 140 aa16.39■□□□□ 0.21
SIMC1-208ENST00000495423 RBAKDNA6NC62 111 aa16.38■□□□□ 0.21
SIMC1-208ENST00000495423 H2AFB1P0C5Y9 115 aa16.38■□□□□ 0.21
SIMC1-208ENST00000495423 PPT1P50897 306 aa16.38■□□□□ 0.21
SIMC1-208ENST00000495423 EMP1P54849 157 aa16.38■□□□□ 0.21
SIMC1-208ENST00000495423 ICAM4Q14773 271 aa16.38■□□□□ 0.21
SIMC1-208ENST00000495423 GDF5OSQ5U4N7 250 aa16.38■□□□□ 0.21
SIMC1-208ENST00000495423 NIPSNAP3BQ9BS92 247 aa16.38■□□□□ 0.21
SIMC1-208ENST00000495423 LRP1BQ9NZR2 4599 aa16.37■□□□□ 0.21
SIMC1-208ENST00000495423 SLC25A5P05141 298 aaKnown RBP16.37■□□□□ 0.21
SIMC1-208ENST00000495423 FHITP49789 147 aa16.37■□□□□ 0.21
SIMC1-208ENST00000495423 ODF3Q96PU9 254 aa16.37■□□□□ 0.21
SIMC1-208ENST00000495423 SERTM2A0A1B0GWG4 89 aa16.36■□□□□ 0.21
SIMC1-208ENST00000495423 HBE1P02100 147 aa16.36■□□□□ 0.21
SIMC1-208ENST00000495423 CNN1P51911 297 aaKnown RBP16.36■□□□□ 0.21
SIMC1-208ENST00000495423 FAM222AQ5U5X8 452 aa16.36■□□□□ 0.21
SIMC1-208ENST00000495423 EXOC3-AS1Q8N2X6 119 aa16.36■□□□□ 0.21
SIMC1-208ENST00000495423 SFT2D1Q8WV19 159 aa16.36■□□□□ 0.21
SIMC1-208ENST00000495423 TCEAL7Q9BRU2 100 aa16.36■□□□□ 0.21
SIMC1-208ENST00000495423 NPIPB6E9PJ23 425 aa16.35■□□□□ 0.21
SIMC1-208ENST00000495423 F6UB75 175 aa16.35■□□□□ 0.21
SIMC1-208ENST00000495423 M0R3E3 92 aa16.35■□□□□ 0.21
SIMC1-208ENST00000495423 EIF3GO75821 320 aaKnown RBP eCLIP16.35■□□□□ 0.21
SIMC1-208ENST00000495423 OR4B1Q8NGF8 309 aa16.35■□□□□ 0.21
SIMC1-208ENST00000495423 CMTM2Q8TAZ6 248 aa16.35■□□□□ 0.21
SIMC1-208ENST00000495423 LINC00477Q96M19 166 aa16.35■□□□□ 0.21
SIMC1-208ENST00000495423 TRBV7-9A0A0J9YWB2 115 aa16.34■□□□□ 0.21
SIMC1-208ENST00000495423 FAM3BP58499 235 aaPredicted RBP16.34■□□□□ 0.21
SIMC1-208ENST00000495423 HIST1H1AQ02539 215 aaPredicted RBP16.34■□□□□ 0.21
SIMC1-208ENST00000495423 AMTNQ6UX39 209 aa16.34■□□□□ 0.21
SIMC1-208ENST00000495423 C9orf47Q6ZRZ4 202 aa16.34■□□□□ 0.21
SIMC1-208ENST00000495423 C5orf17Q8NAS9 161 aa16.34■□□□□ 0.21
SIMC1-208ENST00000495423 PGPA6NDG6 321 aa16.33■□□□□ 0.2
SIMC1-208ENST00000495423 C16orf90A8MZG2 172 aa16.33■□□□□ 0.2
SIMC1-208ENST00000495423 PPP1R14DQ9NXH3 145 aa16.33■□□□□ 0.2
SIMC1-208ENST00000495423 BOLA1Q9Y3E2 137 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms