RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MORN3	Q6PF18	240 aa	Predicted RBP	10.05	□□□□□ -0.8
APTX-231	ENST00000494973	BIN3	Q9NQY0	253 aa		10.05	□□□□□ -0.8
APTX-231	ENST00000494973	C19orf73	Q9NVV2	129 aa		10.05	□□□□□ -0.8
APTX-231	ENST00000494973		A8MTW9	85 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973		C9JCJ5	164 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	RPL35	P42766	123 aa	Known RBP	10.04	□□□□□ -0.8
APTX-231	ENST00000494973	SOHLH1	Q5JUK2	328 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973		Q86TA4	180 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	APRG1	Q8IVJ8	170 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	OR4B1	Q8NGF8	309 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	PRR25	Q96S07	402 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	PARL	Q9H300	379 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	TUBA4B	Q9H853	241 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	ZNF492	Q9P255	531 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	PSG8	Q9UQ74	426 aa		10.04	□□□□□ -0.8
APTX-231	ENST00000494973	KNCN	A6PVL3	124 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	ZNF727	A8MUV8	499 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973		A8MZ25	164 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	PRAC2	D3DTV9	90 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973		F6UB75	175 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	GNG4	P50150	75 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	CEBPG	P53567	150 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	TRPT1	Q86TN4	253 aa	Known RBP	10.03	□□□□□ -0.8
APTX-231	ENST00000494973	SMIM7	Q9BQ49	75 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	C1QTNF4	Q9BXJ3	329 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	SRD5A3	Q9H8P0	318 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	LY96	Q9Y6Y9	160 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	MGAM2	Q2M2H8	2515 aa		10.03	□□□□□ -0.8
APTX-231	ENST00000494973	LTA	P01374	205 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	SFTA3	P0C7M3	94 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	CT45A10	P0DMU9	189 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	CRISP2	P16562	243 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	APOC4	P55056	127 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	KRTAP10-11	P60412	298 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	ZNF674	Q2M3X9	581 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	PRNT	Q86SH4	94 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	BAGE2	Q86Y30	109 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973		Q8N1Y9	231 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	VGLL1	Q99990	258 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	AGPAT4-IT1	Q9H0P7	198 aa		10.02	□□□□□ -0.81
APTX-231	ENST00000494973	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.01	□□□□□ -0.81
APTX-231	ENST00000494973	KIR2DL5B	A0A0G2JN68	375 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	KIR2DL5B	A0A0G2JPC4	375 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	IGLV2-11	P01706	119 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	CDKN1B	P46527	198 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	SRSF3	P84103	164 aa	Known RBP	10.01	□□□□□ -0.81
APTX-231	ENST00000494973	CENPW	Q5EE01	88 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	GDF5OS	Q5U4N7	250 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	TMEM183A	Q8IXX5	376 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	KIR2DL5A	Q8N109	375 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	DEFB125	Q8N687	156 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	KIR2DL5B	Q8NHK3	375 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	C20orf144	Q9BQM9	153 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	NIPSNAP3B	Q9BS92	247 aa		10.01	□□□□□ -0.81
APTX-231	ENST00000494973	TRAV8-1	A0A0A6YYK1	113 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	TRAV34	A0A0B4J273	112 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	TMEM218	A2RU14	115 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	KRBOX1	C9JBD0	128 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	PNRC1	Q12796	327 aa	Predicted RBP	10	□□□□□ -0.81
APTX-231	ENST00000494973	ERCC8	Q13216	396 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	SMUG1	Q53HV7	270 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	COX8C	Q7Z4L0	72 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	IGF2BP2-AS1	Q96M15	143 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	SEC11C	Q9BY50	192 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	NAT8	Q9UHE5	227 aa		10	□□□□□ -0.81
APTX-231	ENST00000494973	UBE2C	O00762	179 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	ZNF705D	P0CH99	300 aa	Predicted RBP	9.99	□□□□□ -0.81
APTX-231	ENST00000494973	ZNF705B	P0CI00	300 aa	Predicted RBP	9.99	□□□□□ -0.81
APTX-231	ENST00000494973	IGHV4-30-4	P0DP06	118 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	TMEM241	Q24JQ0	296 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	AMTN	Q6UX39	209 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973		Q8TAT8	98 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	FAM19A4	Q96LR4	140 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	LINC00479	Q96M42	142 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	CITED4	Q96RK1	184 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	ASCL2	Q99929	193 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	DERL1	Q9BUN8	251 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	WFDC10A	Q9H1F0	79 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	PKD1L1	Q8TDX9	2849 aa		9.99	□□□□□ -0.81
APTX-231	ENST00000494973	KLLN	B2CW77	178 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973		C9JQL5	133 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973		F8W036	122 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973	INS	P01308	110 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973	IGKV3-20	P01619	116 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973	GPX1	P07203	203 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973	DEFB1	P60022	68 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973	ZNF124	Q15973	351 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973	SGK494	Q96LW2	274 aa		9.98	□□□□□ -0.81
APTX-231	ENST00000494973	C7orf71	A4D174	169 aa		9.97	□□□□□ -0.81
APTX-231	ENST00000494973	TMEM256	Q8N2U0	113 aa		9.97	□□□□□ -0.81
APTX-231	ENST00000494973	MLST8	Q9BVC4	326 aa		9.97	□□□□□ -0.81
APTX-231	ENST00000494973	CSTL1	Q9H114	145 aa		9.97	□□□□□ -0.81
APTX-231	ENST00000494973	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	9.97	□□□□□ -0.81
APTX-231	ENST00000494973	DNHD1	Q96M86	4753 aa		9.97	□□□□□ -0.81
APTX-231	ENST00000494973	TRAV21	A0A0B4J279	112 aa		9.96	□□□□□ -0.82
APTX-231	ENST00000494973	PFN1	P07737	140 aa	Known RBP	9.96	□□□□□ -0.82
APTX-231	ENST00000494973	MGST1	P10620	155 aa	Known RBP	9.96	□□□□□ -0.82
APTX-231	ENST00000494973	RPL35A	P18077	110 aa	Known RBP	9.96	□□□□□ -0.82
APTX-231	ENST00000494973	SPINK13	Q1W4C9	94 aa		9.96	□□□□□ -0.82
APTX-231	ENST00000494973	FAM162B	Q5T6X4	162 aa		9.96	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms