RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 LYPD1Q8N2G4 141 aa12.46□□□□□ -0.41
SNX17-209ENST00000494893 CLEC5AQ9NY25 188 aa12.46□□□□□ -0.41
SNX17-209ENST00000494893 KMT2CQ8NEZ4 4911 aaKnown RBP12.46□□□□□ -0.42
SNX17-209ENST00000494893 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 GGTLC3B5MD39 225 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 ATP5G3P48201 142 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 SUMO1P63165 101 aaKnown RBP12.45□□□□□ -0.42
SNX17-209ENST00000494893 PSG9Q00887 426 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 CCDC28AQ8IWP9 274 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 CLUHP3Q96NS8 147 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 Q9H3A6 140 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 TREM1Q9NP99 234 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 ZNF331Q9NQX6 463 aaPredicted RBP12.45□□□□□ -0.42
SNX17-209ENST00000494893 OTORQ9NRC9 128 aa12.45□□□□□ -0.42
SNX17-209ENST00000494893 C9JQL5 133 aa12.44□□□□□ -0.42
SNX17-209ENST00000494893 C3orf84H3BNL1 204 aa12.44□□□□□ -0.42
SNX17-209ENST00000494893 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
SNX17-209ENST00000494893 ZNF705DP0CH99 300 aaPredicted RBP12.44□□□□□ -0.42
SNX17-209ENST00000494893 ZNF705BP0CI00 300 aaPredicted RBP12.44□□□□□ -0.42
SNX17-209ENST00000494893 AMTNQ6UX39 209 aa12.44□□□□□ -0.42
SNX17-209ENST00000494893 OR11H2Q8NH07 326 aa12.44□□□□□ -0.42
SNX17-209ENST00000494893 SLC50A1Q9BRV3 221 aa12.44□□□□□ -0.42
SNX17-209ENST00000494893 PGPA6NDG6 321 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 FXYD7P58549 80 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 PSG3Q16557 428 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 CASC10Q5T4H9 136 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 EXOC3-AS1Q8N2X6 119 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 OR4B1Q8NGF8 309 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 SLC35B3Q9H1N7 401 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 AAMDCQ9H7C9 122 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 XCL2Q9UBD3 114 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 X6R8D5 127 aa12.43□□□□□ -0.42
SNX17-209ENST00000494893 F6UZH7 168 aa12.42□□□□□ -0.42
SNX17-209ENST00000494893 PDE6DO43924 150 aa12.42□□□□□ -0.42
SNX17-209ENST00000494893 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
SNX17-209ENST00000494893 EBLN2Q6P2I7 272 aa12.42□□□□□ -0.42
SNX17-209ENST00000494893 ZNF738Q8NE65 137 aa12.42□□□□□ -0.42
SNX17-209ENST00000494893 DYNC2H1Q8NCM8 4307 aaKnown RBP12.41□□□□□ -0.42
SNX17-209ENST00000494893 ZNF705FA8MVS1 300 aaPredicted RBP12.41□□□□□ -0.42
SNX17-209ENST00000494893 TMEM250H0YL14 139 aa12.41□□□□□ -0.42
SNX17-209ENST00000494893 SLC25A5P05141 298 aaKnown RBP12.41□□□□□ -0.42
SNX17-209ENST00000494893 CNN1P51911 297 aaKnown RBP12.41□□□□□ -0.42
SNX17-209ENST00000494893 Q8NAQ8 132 aa12.41□□□□□ -0.42
SNX17-209ENST00000494893 C5orf17Q8NAS9 161 aa12.41□□□□□ -0.42
SNX17-209ENST00000494893 TCEAL7Q9BRU2 100 aa12.41□□□□□ -0.42
SNX17-209ENST00000494893 PRELID1Q9Y255 219 aa12.41□□□□□ -0.42
SNX17-209ENST00000494893 PRAC2D3DTV9 90 aa12.4□□□□□ -0.42
SNX17-209ENST00000494893 ARL6IP6Q8N6S5 226 aa12.4□□□□□ -0.42
SNX17-209ENST00000494893 OR8A1Q8NGG7 326 aa12.4□□□□□ -0.42
SNX17-209ENST00000494893 IL17DQ8TAD2 202 aa12.4□□□□□ -0.42
SNX17-209ENST00000494893 CMTM2Q8TAZ6 248 aa12.4□□□□□ -0.42
SNX17-209ENST00000494893 C11orf52Q96A22 123 aa12.4□□□□□ -0.42
SNX17-209ENST00000494893 EPDR1Q9UM22 224 aa12.4□□□□□ -0.42
SNX17-209ENST00000494893 TMEM218A2RU14 115 aa12.39□□□□□ -0.43
SNX17-209ENST00000494893 DEFB4AO15263 64 aa12.39□□□□□ -0.43
SNX17-209ENST00000494893 RBMY1A1P0DJD3 496 aaKnown RBP12.39□□□□□ -0.43
SNX17-209ENST00000494893 RBMY1CP0DJD4 496 aa12.39□□□□□ -0.43
SNX17-209ENST00000494893 NUTF2P61970 127 aaKnown RBP12.39□□□□□ -0.43
SNX17-209ENST00000494893 RBMY1FQ15415 496 aaKnown RBP12.39□□□□□ -0.43
SNX17-209ENST00000494893 CYB561D1Q8N8Q1 229 aa12.39□□□□□ -0.43
SNX17-209ENST00000494893 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
SNX17-209ENST00000494893 RPUSD4Q96CM3 377 aaKnown RBP12.39□□□□□ -0.43
SNX17-209ENST00000494893 C11orf68Q9H3H3 251 aaKnown RBP12.39□□□□□ -0.43
SNX17-209ENST00000494893 IGHV4-28A0A0C4DH34 117 aa12.38□□□□□ -0.43
SNX17-209ENST00000494893 SCO2A0A1W2PP80 73 aa12.38□□□□□ -0.43
SNX17-209ENST00000494893 M0R3E3 92 aa12.38□□□□□ -0.43
SNX17-209ENST00000494893 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
SNX17-209ENST00000494893 SFTA3P0C7M3 94 aa12.38□□□□□ -0.43
SNX17-209ENST00000494893 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
SNX17-209ENST00000494893 C1QTNF4Q9BXJ3 329 aa12.38□□□□□ -0.43
SNX17-209ENST00000494893 PEX7O00628 323 aa12.37□□□□□ -0.43
SNX17-209ENST00000494893 CRXO43186 299 aaPredicted RBP12.37□□□□□ -0.43
SNX17-209ENST00000494893 TCRAP04437 139 aa12.37□□□□□ -0.43
SNX17-209ENST00000494893 CSN1S1P47710 185 aa12.37□□□□□ -0.43
SNX17-209ENST00000494893 GNG5P63218 68 aa12.37□□□□□ -0.43
SNX17-209ENST00000494893 HIST1H1AQ02539 215 aaPredicted RBP12.37□□□□□ -0.43
SNX17-209ENST00000494893 ZNF705AQ6ZN79 300 aaPredicted RBP12.37□□□□□ -0.43
SNX17-209ENST00000494893 C1orf158Q8N1D5 194 aa12.37□□□□□ -0.43
SNX17-209ENST00000494893 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
SNX17-209ENST00000494893 M0R2Z0 102 aa12.36□□□□□ -0.43
SNX17-209ENST00000494893 CEBPGP53567 150 aa12.36□□□□□ -0.43
SNX17-209ENST00000494893 SOHLH1Q5JUK2 328 aa12.36□□□□□ -0.43
SNX17-209ENST00000494893 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
SNX17-209ENST00000494893 PLECQ15149 4684 aaKnown RBP12.35□□□□□ -0.43
SNX17-209ENST00000494893 TENM2Q9NT68 2774 aa12.35□□□□□ -0.43
SNX17-209ENST00000494893 KRBOX1C9JBD0 128 aa12.35□□□□□ -0.43
SNX17-209ENST00000494893 DIRC3C9JPN6 131 aa12.35□□□□□ -0.43
SNX17-209ENST00000494893 AKR1C3P42330 323 aa12.35□□□□□ -0.43
SNX17-209ENST00000494893 SPINK13Q1W4C9 94 aa12.35□□□□□ -0.43
SNX17-209ENST00000494893 PARLQ9H300 379 aa12.35□□□□□ -0.43
SNX17-209ENST00000494893 RPH3ALQ9UNE2 315 aa12.35□□□□□ -0.43
SNX17-209ENST00000494893 SACSQ9NZJ4 4579 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 SERTM2A0A1B0GWG4 89 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 ATP6V1G1O75348 118 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 MIFP14174 115 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 FAM74A3Q4VXF1 159 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 GOLT1AQ6ZVE7 132 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 IGF2BP2-AS1Q96M15 143 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 SEC11CQ9BY50 192 aa12.34□□□□□ -0.43
SNX17-209ENST00000494893 KLF12Q9Y4X4 402 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms