RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 HMGN2P05204 90 aaKnown RBP1.84□□□□□ -2.11
SMC4-224ENST00000494612 RBP1P09455 135 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 IFI6P09912 130 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 ZNF705DP0CH99 300 aaPredicted RBP1.84□□□□□ -2.11
SMC4-224ENST00000494612 P0DMU3 169 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 FAM231AP0DMU4 169 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 FAM231CP0DMU5 169 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 CRHBPP24387 322 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 GNG10P50151 68 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 RAB13P51153 203 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 POLR2HP52434 150 aaKnown RBP1.84□□□□□ -2.11
SMC4-224ENST00000494612 H3F3AP84243 136 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 TNFAIP6P98066 277 aaPredicted RBP1.84□□□□□ -2.11
SMC4-224ENST00000494612 MOGQ16653 247 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 LIN52Q52LA3 116 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 TNFAIP8L3Q5GJ75 292 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 LPCAT3Q6P1A2 487 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 RPS27LQ71UM5 84 aaKnown RBP1.84□□□□□ -2.11
SMC4-224ENST00000494612 SPATA12Q7Z6I5 190 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 PXT1Q8NFP0 134 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 OR10X1Q8NGY0 326 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 OR11H2Q8NH07 326 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 MCFD2Q8NI22 146 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 C11orf40Q8WZ69 217 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 BORCS7Q96B45 105 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 TSPAN32Q96QS1 320 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 LINC00470Q9BZP3 86 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 CENPHQ9H3R5 247 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 C11orf1Q9H5F2 150 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 ENY2Q9NPA8 101 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 TAS2R7Q9NYW3 318 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 MRPL27Q9P0M9 148 aaKnown RBP1.84□□□□□ -2.11
SMC4-224ENST00000494612 PCTPQ9UKL6 214 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 PRELID1Q9Y255 219 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 SLC35A3Q9Y2D2 325 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 TIMM22Q9Y584 194 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 MINOS1-NBL1R4GNA1 71 aa1.84□□□□□ -2.11
SMC4-224ENST00000494612 DSPPQ9NZW4 1301 aa1.84□□□□□ -2.12
SMC4-224ENST00000494612 COL7A1Q02388 2944 aa1.84□□□□□ -2.12
SMC4-224ENST00000494612 SACSQ9NZJ4 4579 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 DYNC2H1Q8NCM8 4307 aaKnown RBP1.83□□□□□ -2.12
SMC4-224ENST00000494612 TRGV4A0A0C4DH28 118 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 LCE6AA0A183 80 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 FAM236DA0A1B0GTK5 79 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 A8MT66 165 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 A8MUN3 132 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 I3L521 148 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 LST1O00453 97 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 FAAHO00519 579 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 PLA2G10O15496 165 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 PDE6DO43924 150 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 OR7C1O76099 320 aaPredicted RBP1.83□□□□□ -2.12
SMC4-224ENST00000494612 UBL3O95164 117 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 FAM236CP0DP71 79 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 RPL5P46777 297 aaKnown RBP1.83□□□□□ -2.12
SMC4-224ENST00000494612 GABRA2P47869 451 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 TAS2R30P59541 319 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 HIST1H3AP68431 136 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 DR1Q01658 176 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 ARHGAP11BQ3KRB8 267 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 TMEM155Q4W5P6 130 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 GLT8D1Q68CQ7 371 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 C3orf62Q6ZUJ4 267 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 TCF24Q7RTU0 167 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 SLC30A7Q8NEW0 376 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 OR5D16Q8NGK9 328 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 ROPN1LQ96C74 230 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 SDF2Q99470 211 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 COMMD5Q9GZQ3 224 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 RNASE7Q9H1E1 156 aaKnown RBP1.83□□□□□ -2.12
SMC4-224ENST00000494612 C16orf95Q9H693 158 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 TMEM106BQ9NUM4 274 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 UQCC1Q9NVA1 299 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 GID8Q9NWU2 228 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 TXNL4BQ9NX01 149 aaKnown RBP1.83□□□□□ -2.12
SMC4-224ENST00000494612 ATPIF1Q9UII2 106 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 DNAH9Q9NYC9 4486 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 TANC2Q9HCD6 1990 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 WNK1Q9H4A3 2382 aa1.83□□□□□ -2.12
SMC4-224ENST00000494612 ARHGAP32A7KAX9 2087 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 CSMD3Q7Z407 3707 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 TRBV20OR9-2A0A075B6H5 130 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 IGLV3-9A0A075B6K5 115 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 A0A087WUU8 490 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 A0A0J9YX75 114 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 OVOL1O14753 267 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 CST2P09228 141 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 TFPTP0C1Z6 253 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 S100A7P31151 101 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 RPL27AP46776 148 aaKnown RBP1.82□□□□□ -2.12
SMC4-224ENST00000494612 FXYD7P58549 80 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 TAS2R20P59543 309 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 RPS20P60866 119 aaKnown RBP1.82□□□□□ -2.12
SMC4-224ENST00000494612 COPZ1P61923 177 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 POLR2GP62487 172 aaKnown RBP eCLIP1.82□□□□□ -2.12
SMC4-224ENST00000494612 RPL38P63173 70 aaKnown RBP1.82□□□□□ -2.12
SMC4-224ENST00000494612 C1orf140Q5VVS0 124 aa1.82□□□□□ -2.12
SMC4-224ENST00000494612 LRRC28Q86X40 367 aaPredicted RBP1.82□□□□□ -2.12
SMC4-224ENST00000494612 PDZD9Q8IXQ8 264 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms