RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 A0A1W2PS18 150 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 K7EMT4 169 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 RHPN1-AS1Q9BWJ2 59 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 MYO9AB2RTY4 2548 aa12.57□□□□□ -0.4
ATG4B-225ENST00000494465 FOXA3P55318 350 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-225ENST00000494465 FAM106AQ4KMX7 169 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 ATP5L2Q7Z4Y8 100 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 C20orf173Q96LM9 149 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 A0A1B0GUS0 222 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 HLA-DQA1P01909 254 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 LGALS1P09382 135 aaKnown RBP12.56□□□□□ -0.4
ATG4B-225ENST00000494465 ZNF80P51504 273 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-225ENST00000494465 C16orf92Q96LL3 132 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 UBE2E2Q96LR5 201 aa12.56□□□□□ -0.4
ATG4B-225ENST00000494465 DNAJC9-AS1A6NH13 148 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 SH2D1AO60880 128 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 CT45A10P0DMU9 189 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 RBPMS2Q6ZRY4 209 aaKnown RBP12.55□□□□□ -0.4
ATG4B-225ENST00000494465 PGLYRP4Q96LB8 373 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 GRIFINA4D1Z8 144 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 RAB4BP61018 213 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 CTAG1AP78358 180 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 C12orf57Q99622 126 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 HIST1H2BLQ99880 126 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 AGPAT4-IT1Q9H0P7 198 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 TP53TG3Q9ULZ0 132 aa12.55□□□□□ -0.4
ATG4B-225ENST00000494465 SLAQ13239 276 aa12.54□□□□□ -0.4
ATG4B-225ENST00000494465 FAM162BQ5T6X4 162 aa12.54□□□□□ -0.4
ATG4B-225ENST00000494465 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
ATG4B-225ENST00000494465 CLEC5AQ9NY25 188 aa12.54□□□□□ -0.4
ATG4B-225ENST00000494465 KIAA1644Q3SXP7 199 aa12.54□□□□□ -0.4
ATG4B-225ENST00000494465 NRN1Q9NPD7 142 aa12.54□□□□□ -0.4
ATG4B-225ENST00000494465 TMEM213A2RRL7 107 aa12.53□□□□□ -0.4
ATG4B-225ENST00000494465 FAM181BA6NEQ2 426 aa12.53□□□□□ -0.4
ATG4B-225ENST00000494465 C9orf47Q6ZRZ4 202 aa12.53□□□□□ -0.4
ATG4B-225ENST00000494465 TMEM256Q8N2U0 113 aa12.53□□□□□ -0.4
ATG4B-225ENST00000494465 IGHV4OR15-8A0A075B7B6 117 aa12.52□□□□□ -0.4
ATG4B-225ENST00000494465 A0A087WW49 117 aa12.52□□□□□ -0.4
ATG4B-225ENST00000494465 SMIM6P0DI80 62 aa12.52□□□□□ -0.4
ATG4B-225ENST00000494465 FABP4P15090 132 aa12.52□□□□□ -0.4
ATG4B-225ENST00000494465 ZNF575Q86XF7 245 aa12.52□□□□□ -0.4
ATG4B-225ENST00000494465 KLHDC1Q8N7A1 406 aa12.52□□□□□ -0.4
ATG4B-225ENST00000494465 UFC1Q9Y3C8 167 aa12.52□□□□□ -0.4
ATG4B-225ENST00000494465 APCSP02743 223 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 AMBPP02760 352 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 CRISP2P16562 243 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 S100A2P29034 98 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 CAMPP49913 170 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 LINC00310P59036 64 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 Q6ZSV7 163 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.41
ATG4B-225ENST00000494465 NUPR1O60356 82 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 HBBP68871 147 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 OR10D4PQ8NGN7 298 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 NDFIP1Q9BT67 221 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 A8MWP6 167 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 REC114Q7Z4M0 266 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 SSBP4Q9BWG4 385 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-225ENST00000494465 PPP1R14DQ9NXH3 145 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 NF1P21359 2839 aa12.51□□□□□ -0.41
ATG4B-225ENST00000494465 F2Z2F3 143 aa12.5□□□□□ -0.41
ATG4B-225ENST00000494465 ZNF138P52744 262 aa12.5□□□□□ -0.41
ATG4B-225ENST00000494465 RPL11P62913 178 aaKnown RBP12.5□□□□□ -0.41
ATG4B-225ENST00000494465 Q0VG73 95 aa12.5□□□□□ -0.41
ATG4B-225ENST00000494465 HAX1O00165 279 aa12.5□□□□□ -0.41
ATG4B-225ENST00000494465 LGALS9O00182 355 aa12.5□□□□□ -0.41
ATG4B-225ENST00000494465 HOXD3P31249 432 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-225ENST00000494465 ZNF738Q8NE65 137 aa12.5□□□□□ -0.41
ATG4B-225ENST00000494465 IGKV3-7A0A075B6H7 116 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 TMEM189A5PLL7 270 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-225ENST00000494465 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-225ENST00000494465 BMI1P35226 326 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 SYNJ2BPP57105 145 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-225ENST00000494465 TMSB15BA0A087X1C1 80 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 SRD5A1P18405 259 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 PYY3Q5JQD4 70 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 PRR31Q5SQ13 230 aa12.49□□□□□ -0.41
ATG4B-225ENST00000494465 SRIP30626 198 aa12.48□□□□□ -0.41
ATG4B-225ENST00000494465 DEFB1P60022 68 aa12.48□□□□□ -0.41
ATG4B-225ENST00000494465 SRSF2Q01130 221 aaKnown RBP12.48□□□□□ -0.41
ATG4B-225ENST00000494465 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
ATG4B-225ENST00000494465 A0A1B0GUT8 65 aa12.48□□□□□ -0.41
ATG4B-225ENST00000494465 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
ATG4B-225ENST00000494465 Q6AWC8 147 aa12.48□□□□□ -0.41
ATG4B-225ENST00000494465 MTORP42345 2549 aa12.47□□□□□ -0.41
ATG4B-225ENST00000494465 DEFB136Q30KP8 78 aa12.47□□□□□ -0.41
ATG4B-225ENST00000494465 OVOL1O14753 267 aa12.47□□□□□ -0.41
ATG4B-225ENST00000494465 SERF1AO75920 110 aa12.47□□□□□ -0.41
ATG4B-225ENST00000494465 ESDP10768 282 aa12.47□□□□□ -0.41
ATG4B-225ENST00000494465 KLF5Q13887 457 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-225ENST00000494465 OR10J3Q5JRS4 329 aa12.47□□□□□ -0.41
ATG4B-225ENST00000494465 SMR3AQ99954 134 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms