RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 RNF222A6NCQ9 220 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 SMLR1H3BR10 107 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 M6PRP20645 277 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 ATP6V0CP27449 155 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 TAS2R45P59539 299 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 ZNF266Q14584 549 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 PRR9Q5T870 116 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 OR10G4Q8NGN3 311 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 OR10G9Q8NGN4 311 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 OR10G7Q8NGN6 311 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 RNASE8Q8TDE3 154 aaKnown RBP10.41□□□□□ -0.74
ATG4B-224ENST00000494132 TMEM263Q8WUH6 116 aaKnown RBP10.41□□□□□ -0.74
ATG4B-224ENST00000494132 C16orf74Q96GX8 76 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 HYLS1Q96M11 299 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 SH3BGRL3Q9H299 93 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
ATG4B-224ENST00000494132 RPH3ALQ9UNE2 315 aa10.41□□□□□ -0.74
ATG4B-224ENST00000494132 A0A1W2PPV4 95 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 C7orf71A4D174 169 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 LYRM9A8MSI8 78 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 G3V3Q6 166 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 RNASE4P34096 147 aaKnown RBP10.4□□□□□ -0.74
ATG4B-224ENST00000494132 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 TMEM88Q6PEY1 159 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 Q6ZQT7 251 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 INO80EQ8NBZ0 244 aaPredicted RBP10.4□□□□□ -0.74
ATG4B-224ENST00000494132 FAM19A4Q96LR4 140 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 LINC00477Q96M19 166 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 C20orf144Q9BQM9 153 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 TNFSF18Q9UNG2 199 aa10.4□□□□□ -0.74
ATG4B-224ENST00000494132 KLLNB2CW77 178 aa10.39□□□□□ -0.75
ATG4B-224ENST00000494132 SLC25A5P05141 298 aaKnown RBP10.39□□□□□ -0.75
ATG4B-224ENST00000494132 CDC34P49427 236 aaPredicted RBP10.39□□□□□ -0.75
ATG4B-224ENST00000494132 RPL7L1Q6DKI1 246 aaKnown RBP10.39□□□□□ -0.75
ATG4B-224ENST00000494132 CCDC28AQ8IWP9 274 aa10.39□□□□□ -0.75
ATG4B-224ENST00000494132 ZNF492Q9P255 531 aa10.39□□□□□ -0.75
ATG4B-224ENST00000494132 TIMM8BQ9Y5J9 83 aaPredicted RBP10.39□□□□□ -0.75
ATG4B-224ENST00000494132 DNAH6Q9C0G6 4158 aa10.39□□□□□ -0.75
ATG4B-224ENST00000494132 GPX1P07203 203 aa10.38□□□□□ -0.75
ATG4B-224ENST00000494132 ARL14EPLP0DKL9 152 aa10.38□□□□□ -0.75
ATG4B-224ENST00000494132 CSN1S1P47710 185 aa10.38□□□□□ -0.75
ATG4B-224ENST00000494132 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
ATG4B-224ENST00000494132 ASB13Q8WXK3 278 aa10.38□□□□□ -0.75
ATG4B-224ENST00000494132 PGPA6NDG6 321 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 DIRC3C9JPN6 131 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 F5H768 121 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 ARPC5O15511 151 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 CRISP2P16562 243 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 ZNF138P52744 262 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 PQLC2Q6ZP29 291 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 OR2G3Q8NGZ4 309 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 PYGO2Q9BRQ0 406 aa10.37□□□□□ -0.75
ATG4B-224ENST00000494132 PSMG3Q9BT73 122 aaPredicted RBP10.37□□□□□ -0.75
ATG4B-224ENST00000494132 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
ATG4B-224ENST00000494132 ZNF324O75467 553 aaPredicted RBP10.36□□□□□ -0.75
ATG4B-224ENST00000494132 GNG5P63218 68 aa10.36□□□□□ -0.75
ATG4B-224ENST00000494132 SSX7Q7RTT5 188 aa10.36□□□□□ -0.75
ATG4B-224ENST00000494132 LYPD1Q8N2G4 141 aa10.36□□□□□ -0.75
ATG4B-224ENST00000494132 RAB24Q969Q5 203 aa10.36□□□□□ -0.75
ATG4B-224ENST00000494132 OTORQ9NRC9 128 aa10.36□□□□□ -0.75
ATG4B-224ENST00000494132 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
ATG4B-224ENST00000494132 GAGE12BA1L429 117 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 CBY3A6NI87 242 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 GAGE7O76087 117 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 ATP5G1P05496 136 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 GAGE12FP0CL80 117 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 GAGE12GP0CL81 117 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 GAGE12IP0CL82 117 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 STAG3L2P0CL84 134 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 STAG3L3P0CL85 134 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 P0DMU3 169 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 FAM231AP0DMU4 169 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 FAM231CP0DMU5 169 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 ATP5G3P48201 142 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 UBE2DNLQ8IWF7 75 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 CMTM2Q8TAZ6 248 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 GSN-AS1Q9NRJ2 163 aa10.35□□□□□ -0.75
ATG4B-224ENST00000494132 MUC4Q99102 2169 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 TRAV8-1A0A0A6YYK1 113 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 RBAKDNA6NC62 111 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 RGS13O14921 159 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 MUC21Q5SSG8 566 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 Q6ZTI0 123 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 IQCF2Q8IXL9 164 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 EIF4E3Q8N5X7 224 aaKnown RBP10.34□□□□□ -0.75
ATG4B-224ENST00000494132 RXFP4Q8TDU9 374 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 FRAS1Q86XX4 4008 aa10.34□□□□□ -0.75
ATG4B-224ENST00000494132 GCHFRP30047 84 aa10.33□□□□□ -0.76
ATG4B-224ENST00000494132 SERF2P84101 59 aa10.33□□□□□ -0.76
ATG4B-224ENST00000494132 FAM74A1Q5RGS3 127 aa10.33□□□□□ -0.76
ATG4B-224ENST00000494132 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
ATG4B-224ENST00000494132 C11orf72Q8NBR9 251 aa10.33□□□□□ -0.76
ATG4B-224ENST00000494132 FAM210BQ96KR6 192 aa10.33□□□□□ -0.76
ATG4B-224ENST00000494132 KLF12Q9Y4X4 402 aa10.33□□□□□ -0.76
ATG4B-224ENST00000494132 DNAH10Q8IVF4 4471 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms