RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 SEC11CQ9BY50 192 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 TRBV20OR9-2A0A075B6H5 130 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 KRBOX1C9JBD0 128 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 C9JCJ5 164 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 ATP6V1G1O75348 118 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 LTAP01374 205 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 CD7P09564 240 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 ZNF705DP0CH99 300 aaPredicted RBP8.47□□□□□ -1.05
MCF2L-231ENST00000494043 ZNF705BP0CI00 300 aaPredicted RBP8.47□□□□□ -1.05
MCF2L-231ENST00000494043 CENPWQ5EE01 88 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 TMEM78Q5T7P6 136 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 GDF5OSQ5U4N7 250 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 EBLN2Q6P2I7 272 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 C9orf47Q6ZRZ4 202 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 SAV1Q9H4B6 383 aaPredicted RBP8.47□□□□□ -1.05
MCF2L-231ENST00000494043 PSG8Q9UQ74 426 aa8.47□□□□□ -1.05
MCF2L-231ENST00000494043 KNCNA6PVL3 124 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 DUSP14O95147 198 aaKnown RBP8.46□□□□□ -1.06
MCF2L-231ENST00000494043 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 GNG4P50150 75 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 ZNF138P52744 262 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 ZNF124Q15973 351 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 OXLD1Q5BKU9 147 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 C10orf91Q5T1B1 145 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 PRNTQ86SH4 94 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 GTSCR1Q86UQ5 136 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 APRG1Q8IVJ8 170 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 Q8TAT8 98 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 LINC00477Q96M19 166 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 C19orf73Q9NVV2 129 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 CARHSP1Q9Y2V2 147 aaKnown RBP8.46□□□□□ -1.06
MCF2L-231ENST00000494043 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 DNHD1Q96M86 4753 aa8.46□□□□□ -1.06
MCF2L-231ENST00000494043 EGFEM1PQ0D2K5 195 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 TMEM241Q24JQ0 296 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 ACTL10Q5JWF8 245 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 ASCL2Q99929 193 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 PPP1R14DQ9NXH3 145 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 ZNF492Q9P255 531 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 NAT8Q9UHE5 227 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 LY96Q9Y6Y9 160 aa8.45□□□□□ -1.06
MCF2L-231ENST00000494043 PGPEP1LA6NFU8 196 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 A8MTW9 85 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 H3BMM0 161 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 CT45A10P0DMU9 189 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 SAPCD1Q5SSQ6 148 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 SAMD5Q5TGI4 173 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 TVP23CQ96ET8 276 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 SMIM12Q96EX1 92 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 PRR25Q96S07 402 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 NDFIP1Q9BT67 221 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 WFDC10AQ9H1F0 79 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 SDF2L1Q9HCN8 221 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 ZMAT5Q9UDW3 170 aaKnown RBP8.44□□□□□ -1.06
MCF2L-231ENST00000494043 LENEPQ9Y5L5 61 aa8.44□□□□□ -1.06
MCF2L-231ENST00000494043 TRBV7-9A0A0J9YWB2 115 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 G3V4G9 280 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 IGLV2-8P01709 118 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
MCF2L-231ENST00000494043 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 LINC01551Q86U37 167 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 TMEM183AQ8IXX5 376 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 OR4B1Q8NGF8 309 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 OCC1Q8TAD7 63 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 C8orf49Q96NF6 230 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 MLST8Q9BVC4 326 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 SORL1Q92673 2214 aa8.43□□□□□ -1.06
MCF2L-231ENST00000494043 RBMY1BA6NDE4 496 aaKnown RBP8.42□□□□□ -1.06
MCF2L-231ENST00000494043 RBMY1EA6NEQ0 496 aaKnown RBP8.42□□□□□ -1.06
MCF2L-231ENST00000494043 K7EN84 100 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 IGKV3-20P01619 116 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 APOC3P02656 99 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 RBMY1DP0C7P1 496 aaKnown RBP8.42□□□□□ -1.06
MCF2L-231ENST00000494043 CRISP2P16562 243 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 LEPP41159 167 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 KRTAP10-11P60412 298 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 PNRC1Q12796 327 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-231ENST00000494043 ADIRFQ15847 76 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 TRPT1Q86TN4 253 aaKnown RBP8.42□□□□□ -1.06
MCF2L-231ENST00000494043 STHQ8IWL8 128 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 CLUHP3Q96NS8 147 aa8.42□□□□□ -1.06
MCF2L-231ENST00000494043 AURKAIP1Q9NWT8 199 aaPredicted RBP8.42□□□□□ -1.06
MCF2L-231ENST00000494043 MGST1P10620 155 aaKnown RBP8.41□□□□□ -1.06
MCF2L-231ENST00000494043 S100A1P23297 94 aa8.41□□□□□ -1.06
MCF2L-231ENST00000494043 SMUG1Q53HV7 270 aa8.41□□□□□ -1.06
MCF2L-231ENST00000494043 Q8N1Y9 231 aa8.41□□□□□ -1.06
MCF2L-231ENST00000494043 DEFB125Q8N687 156 aa8.41□□□□□ -1.06
MCF2L-231ENST00000494043 ZFAND2AQ8N6M9 145 aa8.41□□□□□ -1.06
MCF2L-231ENST00000494043 ZC2HC1AQ96GY0 325 aa8.41□□□□□ -1.06
MCF2L-231ENST00000494043 DNAH3Q8TD57 4116 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 MGAM2Q2M2H8 2515 aa8.4□□□□□ -1.06
MCF2L-231ENST00000494043 GCGP01275 180 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms