RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 VGLL1Q99990 258 aa11.52□□□□□ -0.57
SATB1-217ENST00000493952 DEFB131BA0A096LNP1 70 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 BORCS7-ASMTA0A0B4J1R7 106 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 PLAC8L1A1L4L8 177 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 IGLL5B9A064 214 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 H7BYZ3 331 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 ARL14EPLP0DKL9 152 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 HTN1P15515 57 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 NIPSNAP3BQ9BS92 247 aa11.51□□□□□ -0.57
SATB1-217ENST00000493952 HYDINQ4G0P3 5121 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 LY6G6CO95867 125 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 MBP02144 154 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 STAG3L2P0CL84 134 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 STAG3L3P0CL85 134 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 TMEM78Q5T7P6 136 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 RAB24Q969Q5 203 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 GNPNAT1Q96EK6 184 aaPredicted RBP11.5□□□□□ -0.57
SATB1-217ENST00000493952 CYTL1Q9NRR1 136 aa11.5□□□□□ -0.57
SATB1-217ENST00000493952 KLLNB2CW77 178 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
SATB1-217ENST00000493952 CRISP2P16562 243 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 CSN1S1P47710 185 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 SSX7Q7RTT5 188 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 RNASE8Q8TDE3 154 aaKnown RBP11.49□□□□□ -0.57
SATB1-217ENST00000493952 C16orf74Q96GX8 76 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 OTORQ9NRC9 128 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 ZNF492Q9P255 531 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 APLNQ9ULZ1 77 aa11.49□□□□□ -0.57
SATB1-217ENST00000493952 IGHV4-4A0A075B6R2 117 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 C7orf71A4D174 169 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 TAAR5O14804 337 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 TCTAP57738 103 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 CD300CQ08708 224 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 BTN1A1Q13410 526 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 PRR9Q5T870 116 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 Q8TAT8 98 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 TMEM263Q8WUH6 116 aaKnown RBP11.48□□□□□ -0.57
SATB1-217ENST00000493952 HYLS1Q96M11 299 aa11.48□□□□□ -0.57
SATB1-217ENST00000493952 RBAKDNA6NC62 111 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 PGPA6NDG6 321 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 GPX1P07203 203 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 ZNF138P52744 262 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 DAD1P61803 113 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 ZNF345Q14585 488 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 ZNF493Q6ZR52 646 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 RXFP4Q8TDU9 374 aa11.47□□□□□ -0.57
SATB1-217ENST00000493952 ACTR3CQ9C0K3 210 aaPredicted RBP11.47□□□□□ -0.57
SATB1-217ENST00000493952 HMSDA8MTL9 139 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 GCHFRP30047 84 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 RNASE4P34096 147 aaKnown RBP11.46□□□□□ -0.57
SATB1-217ENST00000493952 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 FAM74A1Q5RGS3 127 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 LGALS9CQ6DKI2 356 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 SUN5Q8TC36 379 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 PYGO2Q9BRQ0 406 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 RPH3ALQ9UNE2 315 aa11.46□□□□□ -0.57
SATB1-217ENST00000493952 ZNF324O75467 553 aaPredicted RBP11.45□□□□□ -0.58
SATB1-217ENST00000493952 NMBP08949 121 aa11.45□□□□□ -0.58
SATB1-217ENST00000493952 DEFB130BP0DP73 79 aa11.45□□□□□ -0.58
SATB1-217ENST00000493952 DEFB130AP0DP74 79 aa11.45□□□□□ -0.58
SATB1-217ENST00000493952 HTN3P15516 51 aa11.45□□□□□ -0.58
SATB1-217ENST00000493952 CCDC28AQ8IWP9 274 aa11.45□□□□□ -0.58
SATB1-217ENST00000493952 CMTM2Q8TAZ6 248 aa11.45□□□□□ -0.58
SATB1-217ENST00000493952 ARPC5LQ9BPX5 153 aa11.45□□□□□ -0.58
SATB1-217ENST00000493952 TRBV7-9A0A0J9YWB2 115 aa11.44□□□□□ -0.58
SATB1-217ENST00000493952 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
SATB1-217ENST00000493952 CXorf1O96002 111 aa11.44□□□□□ -0.58
SATB1-217ENST00000493952 GNG5P63218 68 aa11.44□□□□□ -0.58
SATB1-217ENST00000493952 Q6ZQT7 251 aa11.44□□□□□ -0.58
SATB1-217ENST00000493952 NOP10Q9NPE3 64 aaKnown RBP11.44□□□□□ -0.58
SATB1-217ENST00000493952 TIMM8BQ9Y5J9 83 aaPredicted RBP11.44□□□□□ -0.58
SATB1-217ENST00000493952 AKR1C8PQ5T2L2 129 aa11.43□□□□□ -0.58
SATB1-217ENST00000493952 GOLT1AQ6ZVE7 132 aa11.43□□□□□ -0.58
SATB1-217ENST00000493952 ARL6IP6Q8N6S5 226 aa11.43□□□□□ -0.58
SATB1-217ENST00000493952 ST6GAL2Q96JF0 529 aa11.43□□□□□ -0.58
SATB1-217ENST00000493952 TMEM167BQ9NRX6 74 aa11.43□□□□□ -0.58
SATB1-217ENST00000493952 SNURFLB1AK76 121 aa11.42□□□□□ -0.58
SATB1-217ENST00000493952 Q6ZNX1 250 aa11.42□□□□□ -0.58
SATB1-217ENST00000493952 IQCF2Q8IXL9 164 aa11.42□□□□□ -0.58
SATB1-217ENST00000493952 EIF4E3Q8N5X7 224 aaKnown RBP11.42□□□□□ -0.58
SATB1-217ENST00000493952 TMED6Q8WW62 240 aa11.42□□□□□ -0.58
SATB1-217ENST00000493952 LINC00467Q9BRT7 94 aa11.42□□□□□ -0.58
SATB1-217ENST00000493952 NDUFAF3Q9BU61 184 aa11.42□□□□□ -0.58
SATB1-217ENST00000493952 NACAE9PAV3 2078 aa11.42□□□□□ -0.58
SATB1-217ENST00000493952 TRAV8-1A0A0A6YYK1 113 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 A0A0D9SG52 128 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 GGTLC3B5MD39 225 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 BCL2L11O43521 198 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 C5orf17Q8NAS9 161 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 C11orf72Q8NBR9 251 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 LENEPQ9Y5L5 61 aa11.41□□□□□ -0.58
SATB1-217ENST00000493952 KMT2AQ03164 3969 aa11.4□□□□□ -0.58
SATB1-217ENST00000493952 VPS13DQ5THJ4 4388 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms