RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 WIPF3A6NGB9 483 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 EFNA2O43921 213 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 LTAP01374 205 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 CR1LQ2VPA4 569 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 DEFB125Q8N687 156 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 DKK2Q9UBU2 259 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 HEATR5BQ9P2D3 2071 aa6.28□□□□□ -1.4
BRCA1-221ENST00000493795 DNAJC13O75165 2243 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV1-69DA0A0B4J2H0 117 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 IGLC7A0M8Q6 106 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 CCL25O15444 150 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV1-69P01742 117 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 TEX36Q5VZQ5 186 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 GGNQ86UU5 652 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 JMJD7-PLA2G4BH0Y9G9 81 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 IGKV1-16P04430 117 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 ADCYAP1P18509 176 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 HIGD2BQ4VC39 106 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 A0A0G2JNJ9 132 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 RNF223E7ERA6 249 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 IGKV4-1P06312 121 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 Q9UFV3 132 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-221ENST00000493795 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-221ENST00000493795 C5orf63A6NC05 138 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 EPOPA6NHQ4 379 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 H0Y9J4 135 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 SND1-IT1Q9HBX3 110 aa6.27□□□□□ -1.41
BRCA1-221ENST00000493795 CYYR1Q96J86 154 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 NOP10Q9NPE3 64 aaKnown RBP6.26□□□□□ -1.41
BRCA1-221ENST00000493795 NDUFA4L2Q9NRX3 87 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 SMCHD1A6NHR9 2005 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 A0A0G2JRQ6 117 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 IGLV3-19P01714 112 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 FOXI2Q6ZQN5 318 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 U3KQE9 123 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 BTAF1O14981 1849 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-221ENST00000493795 TMEM14BQ9NUH8 114 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV7-4-1A0A0J9YVY3 117 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 COX7A2LO14548 114 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 TRBV12-3P01733 135 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 HIST2H2BCQ6DN03 193 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 Q6ZVH6 145 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 VOPP1Q96AW1 172 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 ZC2HC1AQ96GY0 325 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 SCN1AP35498 2009 aa6.26□□□□□ -1.41
BRCA1-221ENST00000493795 CSRP3P50461 194 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 LINC00205P59089 165 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 MRPL23Q16540 153 aaKnown RBP6.25□□□□□ -1.41
BRCA1-221ENST00000493795 RNF183Q96D59 192 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 PKD1L3Q7Z443 1732 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 ZNF638Q14966 1978 aaKnown RBP6.25□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV2-70P01814 119 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 IGLC1P0CG04 106 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 C5orf38Q86SI9 138 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 TMEM61Q8N0U2 210 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 C11orf52Q96A22 123 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 TEX22C9J3V5 150 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 NCR3O14931 201 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 DUX4L9Q6RFH8 374 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-221ENST00000493795 RGPD4Q7Z3J3 1758 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 G3V318 75 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 CRYGBP07316 175 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 ASXL3Q9C0F0 2248 aa6.25□□□□□ -1.41
BRCA1-221ENST00000493795 TNRC6CQ9HCJ0 1690 aaKnown RBP6.25□□□□□ -1.41
BRCA1-221ENST00000493795 J3QLI3 93 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 ZNF833PQ6ZTB9 187 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 PNRC2Q9NPJ4 139 aaKnown RBP6.24□□□□□ -1.41
BRCA1-221ENST00000493795 CCL18P55774 89 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 Q6ZRM9 215 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 K7EM74 188 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV2-70DA0A0C4DH43 119 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 SCN4AP35499 1836 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 FAM240AA0A1B0GVK7 77 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 ATP5G1P05496 136 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 C5orf24Q7Z6I8 188 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 KIAA1551Q9HCM1 1747 aa6.24□□□□□ -1.41
BRCA1-221ENST00000493795 K7EQD1 137 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 NDUFA1O15239 70 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 Q96MF0 132 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 NHSQ6T4R5 1651 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 QRFPP83859 136 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 WDR86Q86TI4 376 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 NUP214P35658 2090 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-221ENST00000493795 ELANEP08246 267 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 PDE6GP18545 87 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 MST1P26927 711 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 SP5Q6BEB4 398 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-221ENST00000493795 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 DIRC1Q969H9 104 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 FANCD2OSQ96PS1 177 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 B9D2Q9BPU9 175 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 MYO16Q9Y6X6 1858 aa6.23□□□□□ -1.41
BRCA1-221ENST00000493795 USP17L23D6RBM5 183 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 H3BUA1 57 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV3-30P01768 117 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms