RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SERF2P84101 59 aa7.49□□□□□ -1.21
TRAPPC12-222ENST00000493792 FAM74A1Q5RGS3 127 aa7.49□□□□□ -1.21
TRAPPC12-222ENST00000493792 AKR1C8PQ5T2L2 129 aa7.49□□□□□ -1.21
TRAPPC12-222ENST00000493792 CMTM2Q8TAZ6 248 aa7.49□□□□□ -1.21
TRAPPC12-222ENST00000493792 ACTR3CQ9C0K3 210 aaPredicted RBP7.49□□□□□ -1.21
TRAPPC12-222ENST00000493792 CELA1Q9UNI1 258 aa7.49□□□□□ -1.21
TRAPPC12-222ENST00000493792 PGPA6NDG6 321 aa7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 SPART-AS1P0CW21 52 aa7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 TMEM78Q5T7P6 136 aa7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 RAB24Q969Q5 203 aa7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 LINC00477Q96M19 166 aa7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 ARPC5LQ9BPX5 153 aa7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 AGPAT4-IT1Q9H0P7 198 aa7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 YTHDF2Q9Y5A9 579 aaKnown RBP7.48□□□□□ -1.21
TRAPPC12-222ENST00000493792 TRAV12-3A0A0B4J271 114 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 KANTRA0A1W2PQU2 76 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 PFDN1O60925 122 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 PRM2P04554 102 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 KIR3DS1Q14943 382 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 FAM222AQ5U5X8 452 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 GFI1BQ5VTD9 330 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 Q6ZTC4 211 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 LYPD1Q8N2G4 141 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 TMEM256Q8N2U0 113 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 KCNRGQ8N5I3 272 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 OR11H4Q8NGC9 324 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 RXFP4Q8TDU9 374 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 VGLL1Q99990 258 aa7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 ZNF471Q9BX82 626 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC12-222ENST00000493792 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.21
TRAPPC12-222ENST00000493792 A0A0D9SG52 128 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 TEX48A0A1B0GUV7 120 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 IGLL5B9A064 214 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 C11orf94C9JXX5 98 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 LY6G6CO95867 125 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 CXorf1O96002 111 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 SLC25A5P05141 298 aaKnown RBP7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 GPX1P07203 203 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 STAG3L2P0CL84 134 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 STAG3L3P0CL85 134 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 HTN3P15516 51 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 AZU1P20160 251 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 GCHFRP30047 84 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 RNASE4P34096 147 aaKnown RBP7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 TAS2R60P59551 318 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 ZNF345Q14585 488 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 C12orf74Q32Q52 190 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 CCDC28AQ8IWP9 274 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 Q8TAT8 98 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 ODF3Q96PU9 254 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 OTORQ9NRC9 128 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 CYTL1Q9NRR1 136 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 PLA2G2EQ9NZK7 142 aa7.46□□□□□ -1.22
TRAPPC12-222ENST00000493792 TRAV10A0A0B4J240 114 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 C7orf71A4D174 169 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 HMSDA8MTL9 139 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 H7BYZ3 331 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 ZNF138P52744 262 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 DAD1P61803 113 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 GNG5P63218 68 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 Q6ZNX1 250 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 C9orf47Q6ZRZ4 202 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 GOLT1AQ6ZVE7 132 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 C2CD4CQ8TF44 421 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 C20orf144Q9BQM9 153 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 TMEM167BQ9NRX6 74 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 DKK2Q9UBU2 259 aa7.45□□□□□ -1.22
TRAPPC12-222ENST00000493792 DEFB131BA0A096LNP1 70 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 CTXND1A0A1B0GTU2 59 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 RBAKDNA6NC62 111 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 DIRC3C9JPN6 131 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 BCL2L11O43521 198 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 FGF8P55075 233 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 EIF5AP63241 154 aaKnown RBP7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 CD300CQ08708 224 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 BTN1A1Q13410 526 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 TMUB2Q71RG4 321 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 SSX7Q7RTT5 188 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 C16orf74Q96GX8 76 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 ST6GAL2Q96JF0 529 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 ZNF492Q9P255 531 aa7.44□□□□□ -1.22
TRAPPC12-222ENST00000493792 RGS13O14921 159 aa7.43□□□□□ -1.22
TRAPPC12-222ENST00000493792 UBE2G2P60604 165 aa7.43□□□□□ -1.22
TRAPPC12-222ENST00000493792 SUMO1P63165 101 aaKnown RBP7.43□□□□□ -1.22
TRAPPC12-222ENST00000493792 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
TRAPPC12-222ENST00000493792 AKAP14Q86UN6 197 aa7.43□□□□□ -1.22
TRAPPC12-222ENST00000493792 TMPRSS5Q9H3S3 457 aa7.43□□□□□ -1.22
TRAPPC12-222ENST00000493792 TIMM8BQ9Y5J9 83 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC12-222ENST00000493792 DYNC1H1Q14204 4646 aaKnown RBP7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 CBY3A6NI87 242 aa7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 SNURFLB1AK76 121 aa7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 KLLNB2CW77 178 aa7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 K7EQM0 130 aa7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 IFNA7P01567 189 aa7.42□□□□□ -1.22
TRAPPC12-222ENST00000493792 ZNF493Q6ZR52 646 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms