RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 STAG3L2P0CL84 134 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 STAG3L3P0CL85 134 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 RHOBP62745 196 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 ACOT6Q3I5F7 207 aaPredicted RBP4.89□□□□□ -1.63
VPS52-219ENST00000493379 FFAR4Q5NUL3 377 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 RPL7L1Q6DKI1 246 aaKnown RBP4.89□□□□□ -1.63
VPS52-219ENST00000493379 PQLC2Q6ZP29 291 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 MIR17HGQ75NE6 70 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 STHQ8IWL8 128 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 FXYD5Q96DB9 178 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 OR51M1Q9H341 326 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 PRELID1Q9Y255 219 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 RFNGQ9Y644 331 aa4.89□□□□□ -1.63
VPS52-219ENST00000493379 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
VPS52-219ENST00000493379 KNCNA6PVL3 124 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 SMLR1H3BR10 107 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 SLC17A3O00476 420 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 ARPC5O15511 151 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 DUSP14O95147 198 aaKnown RBP4.88□□□□□ -1.63
VPS52-219ENST00000493379 SEC11BP0C7V7 166 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 NUTF2P61970 127 aaKnown RBP4.88□□□□□ -1.63
VPS52-219ENST00000493379 PSG9Q00887 426 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 LGALSLQ3ZCW2 172 aaPredicted RBP4.88□□□□□ -1.63
VPS52-219ENST00000493379 ACTL10Q5JWF8 245 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 GDF5OSQ5U4N7 250 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 ZNF705AQ6ZN79 300 aaPredicted RBP4.88□□□□□ -1.63
VPS52-219ENST00000493379 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 OR8A1Q8NGG7 326 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 OR10G4Q8NGN3 311 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 OR10G9Q8NGN4 311 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 OR10G7Q8NGN6 311 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 STOML3Q8TAV4 291 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 HYLS1Q96M11 299 aa4.88□□□□□ -1.63
VPS52-219ENST00000493379 TRBV7-9A0A0J9YWB2 115 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 ZNF705FA8MVS1 300 aaPredicted RBP4.87□□□□□ -1.63
VPS52-219ENST00000493379 CRXO43186 299 aaPredicted RBP4.87□□□□□ -1.63
VPS52-219ENST00000493379 AMBPP02760 352 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 ZNF705DP0CH99 300 aaPredicted RBP4.87□□□□□ -1.63
VPS52-219ENST00000493379 ZNF705BP0CI00 300 aaPredicted RBP4.87□□□□□ -1.63
VPS52-219ENST00000493379 PYYP10082 97 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 TAS2R45P59539 299 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 ANXA2RQ3ZCQ2 193 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 KHDC3LQ587J8 217 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 EBLN2Q6P2I7 272 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 HSD17B11Q8NBQ5 300 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 FAM19A4Q96LR4 140 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 LINC00052Q96N35 136 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 ODF3Q96PU9 254 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 PAXXQ9BUH6 204 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 C1QTNF4Q9BXJ3 329 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 AGRNO00468 2067 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 DNAH11Q96DT5 4516 aa4.87□□□□□ -1.63
VPS52-219ENST00000493379 A0A1B0GVG6 124 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 A0A1W2PPV4 95 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 RBAKDNA6NC62 111 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 SMIM9A6NGZ8 99 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 F6UB75 175 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 BCL2L11O43521 198 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 SLC25A5P05141 298 aaKnown RBP4.86□□□□□ -1.63
VPS52-219ENST00000493379 NMBP08949 121 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 RPL35AP18077 110 aaKnown RBP4.86□□□□□ -1.63
VPS52-219ENST00000493379 C4BPBP20851 252 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 HLA-DMBP28068 263 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 CNN1P51911 297 aaKnown RBP4.86□□□□□ -1.63
VPS52-219ENST00000493379 DEFB1P60022 68 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 RAB2AP61019 212 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 ZNF726P1Q15940 193 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 C9orf47Q6ZRZ4 202 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 TMUB2Q71RG4 321 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 BAP18Q8IXM2 172 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 RNF182Q8N6D2 247 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 MBD3L1Q8WWY6 194 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 RPUSD4Q96CM3 377 aaKnown RBP4.86□□□□□ -1.63
VPS52-219ENST00000493379 LINC00477Q96M19 166 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 SH3BGRL3Q9H299 93 aa4.86□□□□□ -1.63
VPS52-219ENST00000493379 C11orf68Q9H3H3 251 aaKnown RBP4.86□□□□□ -1.63
VPS52-219ENST00000493379 UMAD1C9J7I0 102 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 PRAC2D3DTV9 90 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 CA1P00915 261 aaPredicted RBP4.85□□□□□ -1.63
VPS52-219ENST00000493379 MIFP14174 115 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 CRISP2P16562 243 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 CDC34P49427 236 aaPredicted RBP4.85□□□□□ -1.63
VPS52-219ENST00000493379 EIF5AP63241 154 aaKnown RBP4.85□□□□□ -1.63
VPS52-219ENST00000493379 DEFB135Q30KP9 77 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 DPPA3Q6W0C5 159 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 AKAP14Q86UN6 197 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 C1orf158Q8N1D5 194 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 Q8NAQ8 132 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 LRRC20Q8TCA0 184 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 TMED6Q8WW62 240 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 IGF2BP2-AS1Q96M15 143 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 RARRES2Q99969 163 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 C20orf144Q9BQM9 153 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 ACTR3CQ9C0K3 210 aaPredicted RBP4.85□□□□□ -1.63
VPS52-219ENST00000493379 LENEPQ9Y5L5 61 aa4.85□□□□□ -1.63
VPS52-219ENST00000493379 TRAV1-1A0A0B4J248 108 aa4.84□□□□□ -1.63
VPS52-219ENST00000493379 CTXND1A0A1B0GTU2 59 aa4.84□□□□□ -1.63
VPS52-219ENST00000493379 KANTRA0A1W2PQU2 76 aa4.84□□□□□ -1.63
VPS52-219ENST00000493379 A0A1W2PRE2 83 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms