RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 ZNF738Q8NE65 137 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 ZNF256Q9Y2P7 627 aaPredicted RBP7.23□□□□□ -1.25
USP54-214ENST00000492357 CUBNO60494 3623 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 A0A0J9YX75 114 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 CXorf65A6NEN9 183 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 GCGP01275 180 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 MT-ND4LP03901 98 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 CT45A10P0DMU9 189 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 CRISP2P16562 243 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 EDN2P20800 178 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 CEBPGP53567 150 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 RPL23P62829 140 aaKnown RBP7.22□□□□□ -1.25
USP54-214ENST00000492357 GNG5P63218 68 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 ZNF674Q2M3X9 581 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 PRR31Q5SQ13 230 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 APRG1Q8IVJ8 170 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 CLRN3Q8NCR9 226 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 PRR25Q96S07 402 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 DERL1Q9BUN8 251 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 SAV1Q9H4B6 383 aaPredicted RBP7.22□□□□□ -1.25
USP54-214ENST00000492357 OSTCQ9NRP0 149 aa7.22□□□□□ -1.25
USP54-214ENST00000492357 OR11H12B2RN74 326 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 AMBPP02760 352 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 SNRPCP09234 159 aaKnown RBP7.21□□□□□ -1.26
USP54-214ENST00000492357 TSPOP30536 169 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 CT83Q5H943 113 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 PSMG4Q5JS54 123 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 RNF182Q8N6D2 247 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 C15orf54Q8N8G6 183 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 OR4B1Q8NGF8 309 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 ISOC2Q96AB3 205 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 BTF3L4Q96K17 158 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 FAM19A4Q96LR4 140 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 ASCL2Q99929 193 aa7.21□□□□□ -1.26
USP54-214ENST00000492357 FAM231BA6NCW3 169 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 IGLV2-8P01709 118 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 ZNF688P0C7X2 276 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 HLA-DRB4P13762 266 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 LEPP41159 167 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 ADIRFQ15847 76 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 SMUG1Q53HV7 270 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 LURAP1LQ8IV03 231 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 GBGT1Q8N5D6 347 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 OCC1Q8TAD7 63 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 C20orf173Q96LM9 149 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 IMMP2LQ96T52 175 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 C20orf144Q9BQM9 153 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 AGPAT4-IT1Q9H0P7 198 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 TUBA4BQ9H853 241 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 MAP6D1Q9H9H5 199 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 RPH3ALQ9UNE2 315 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 HLA-DRB4X5D2U9 266 aa7.2□□□□□ -1.26
USP54-214ENST00000492357 TENM1Q9UKZ4 2725 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 IGKV3-7A0A075B6H7 116 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 TRAV9-1A0A075B6T8 112 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 IGKV2-40A0A087WW87 121 aaPredicted RBP7.19□□□□□ -1.26
USP54-214ENST00000492357 ZNF705FA8MVS1 300 aaPredicted RBP7.19□□□□□ -1.26
USP54-214ENST00000492357 M0R036 132 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 IGKV2D-40P01614 121 aaPredicted RBP7.19□□□□□ -1.26
USP54-214ENST00000492357 HLA-DMBP28068 263 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 NUTF2P61970 127 aaKnown RBP7.19□□□□□ -1.26
USP54-214ENST00000492357 GUCA2BQ16661 112 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 ODF3L2Q3SX64 289 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 PRNTQ86SH4 94 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 GTSCR1Q86UQ5 136 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 WFDC3Q8IUB2 231 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 SFRP2Q96HF1 295 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 LINC00479Q96M42 142 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 VGLL1Q99990 258 aa7.19□□□□□ -1.26
USP54-214ENST00000492357 TRAV8-1A0A0A6YYK1 113 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 TRAV34A0A0B4J273 112 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 XKRY2A2RUG3 117 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 C7orf77A4D0Y5 90 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 C19orf71A6NCJ1 209 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 FABP5P3A8MUU1 101 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 KLLNB2CW77 178 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 PRAC2D3DTV9 90 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 CXCL1P09341 107 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 TFPI2P48307 235 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 DEFB131AP59861 70 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 RPS20P60866 119 aaKnown RBP7.18□□□□□ -1.26
USP54-214ENST00000492357 RPL19P84098 196 aaKnown RBP7.18□□□□□ -1.26
USP54-214ENST00000492357 HIST1H1AQ02539 215 aaPredicted RBP7.18□□□□□ -1.26
USP54-214ENST00000492357 IBA57Q5T440 356 aaKnown RBP7.18□□□□□ -1.26
USP54-214ENST00000492357 FAM162BQ5T6X4 162 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 IGFL4Q6B9Z1 124 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 SPATA3Q8NHX4 192 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 DAZAP1Q96EP5 407 aaKnown RBP7.18□□□□□ -1.26
USP54-214ENST00000492357 GFRA4Q9GZZ7 299 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 WNK1Q9H4A3 2382 aa7.18□□□□□ -1.26
USP54-214ENST00000492357 H3BMM0 161 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 H7BYZ3 331 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 PFN1P07737 140 aaKnown RBP7.17□□□□□ -1.26
USP54-214ENST00000492357 CDKN1BP46527 198 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 EGFEM1PQ0D2K5 195 aa7.17□□□□□ -1.26
USP54-214ENST00000492357 Q6AWC8 147 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 579.5 ms