RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 KLF12Q9Y4X4 402 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 HERC1Q15751 4861 aa11.41□□□□□ -0.58
SRGAP3-209ENST00000490889 TRGV2A0A075B6R0 118 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 C5orf51A6NDU8 294 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 LYRM1O43325 122 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 TCRBP04435 133 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 BAXQ07812 192 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 PRR9Q5T870 116 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 Q6ZQT7 251 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 EXOC3-AS1Q8N2X6 119 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 C2orf50Q96LR7 162 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
SRGAP3-209ENST00000490889 TRGV1A0A0A0MS02 117 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 SULT1A1P50225 295 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 IL15RAQ13261 267 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 ANXA2RQ3ZCQ2 193 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 EIF4E3Q8N5X7 224 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 TMEM252Q8N6L7 170 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 ZNF680Q8NEM1 530 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 LINC00467Q9BRT7 94 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 TMEM14CQ9P0S9 112 aa11.39□□□□□ -0.59
SRGAP3-209ENST00000490889 SPINK4O60575 86 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 HIST1H1EP10412 219 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 FGF7P21781 194 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 RNASE4P34096 147 aaKnown RBP11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 FUSP35637 526 aaKnown RBP eCLIP11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 TCL1AP56279 114 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 S100A10P60903 97 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 RAB32Q13637 225 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 CHAC2Q8WUX2 184 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 BLNKQ8WV28 456 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 NUDT15Q9NV35 164 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 TP53TG3Q9ULZ0 132 aa11.38□□□□□ -0.59
SRGAP3-209ENST00000490889 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 IGHV3-53P01767 116 aa11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 CRISP2P16562 243 aa11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 S100A11P31949 105 aa11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 C12orf45Q8N5I9 185 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 ZFAND2AQ8N6M9 145 aa11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 LINC00477Q96M19 166 aa11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 PRELID1Q9Y255 219 aa11.37□□□□□ -0.59
SRGAP3-209ENST00000490889 SIVA1O15304 175 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 PVALBP20472 110 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 PDE6HQ13956 83 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 ICAM4Q14773 271 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 FAM167A-AS1Q96KT0 104 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 VGLL1Q99990 258 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 SLC25A2Q9BXI2 301 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 TIMM9Q9Y5J7 89 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 TNFRSF18Q9Y5U5 241 aa11.36□□□□□ -0.59
SRGAP3-209ENST00000490889 MPDU1O75352 247 aa11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 NXPH4O95158 308 aa11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 GPX1P07203 203 aa11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 FAM122CQ6P4D5 195 aa11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 STX12Q86Y82 276 aa11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 ST6GAL2Q96JF0 529 aa11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 NPCDR1Q9BY65 106 aa11.35□□□□□ -0.59
SRGAP3-209ENST00000490889 PAX4O43316 350 aa11.34□□□□□ -0.59
SRGAP3-209ENST00000490889 HBG1P69891 147 aa11.34□□□□□ -0.59
SRGAP3-209ENST00000490889 HBG2P69892 147 aa11.34□□□□□ -0.59
SRGAP3-209ENST00000490889 MIR17HGQ75NE6 70 aa11.34□□□□□ -0.59
SRGAP3-209ENST00000490889 GPN1Q9HCN4 374 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-209ENST00000490889 ICOSQ9Y6W8 199 aa11.34□□□□□ -0.59
SRGAP3-209ENST00000490889 IGHV1OR15-1A0A075B7D0 117 aa11.33□□□□□ -0.6
SRGAP3-209ENST00000490889 H2AFB2P0C5Z0 115 aa11.33□□□□□ -0.6
SRGAP3-209ENST00000490889 ATP6V1FQ16864 119 aa11.33□□□□□ -0.6
SRGAP3-209ENST00000490889 Q8TAT8 98 aa11.33□□□□□ -0.6
SRGAP3-209ENST00000490889 THAP6Q8TBB0 222 aa11.33□□□□□ -0.6
SRGAP3-209ENST00000490889 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
SRGAP3-209ENST00000490889 ZNF492Q9P255 531 aa11.33□□□□□ -0.6
SRGAP3-209ENST00000490889 RGS13O14921 159 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 NMBP08949 121 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 CRYBA4P53673 196 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 NHLH2Q02577 135 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 FHL2Q14192 279 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 TMEM78Q5T7P6 136 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 C8orf49Q96NF6 230 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 PRO0255Q9UI72 69 aa11.32□□□□□ -0.6
SRGAP3-209ENST00000490889 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
SRGAP3-209ENST00000490889 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
SRGAP3-209ENST00000490889 FXYD5Q96DB9 178 aa11.31□□□□□ -0.6
SRGAP3-209ENST00000490889 PHYHIPLQ96FC7 376 aa11.31□□□□□ -0.6
SRGAP3-209ENST00000490889 PRAF2O60831 178 aa11.3□□□□□ -0.6
SRGAP3-209ENST00000490889 OR10J4P0C629 311 aa11.3□□□□□ -0.6
SRGAP3-209ENST00000490889 DNAH10OSP0CZ25 163 aa11.3□□□□□ -0.6
SRGAP3-209ENST00000490889 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
SRGAP3-209ENST00000490889 ARPC5LQ9BPX5 153 aa11.3□□□□□ -0.6
SRGAP3-209ENST00000490889 OR51M1Q9H341 326 aa11.3□□□□□ -0.6
SRGAP3-209ENST00000490889 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
SRGAP3-209ENST00000490889 SIX6O95475 246 aa11.29□□□□□ -0.6
SRGAP3-209ENST00000490889 ZNF138P52744 262 aa11.29□□□□□ -0.6
SRGAP3-209ENST00000490889 XGP55808 180 aa11.29□□□□□ -0.6
SRGAP3-209ENST00000490889 MUC21Q5SSG8 566 aa11.29□□□□□ -0.6
SRGAP3-209ENST00000490889 PGPEP1Q9NXJ5 209 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms