RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 PFDN5Q99471 154 aa8.22□□□□□ -1.09
SRSF4-204ENST00000489898 TMEM208Q9BTX3 173 aa8.22□□□□□ -1.09
SRSF4-204ENST00000489898 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 RHOBP62745 196 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 BTN1A1Q13410 526 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 PDE6HQ13956 83 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 GUK1Q16774 197 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 STX12Q86Y82 276 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 C15orf53Q8NAA6 179 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 OR1L4Q8NGR5 311 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 WDR61Q9GZS3 305 aaKnown RBP8.21□□□□□ -1.1
SRSF4-204ENST00000489898 AGPAT4-IT1Q9H0P7 198 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 LINC00588Q9Y4M8 146 aa8.21□□□□□ -1.1
SRSF4-204ENST00000489898 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
SRSF4-204ENST00000489898 CBY3A6NI87 242 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 PRSS29PA6NIE9 313 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 ARPC5O15511 151 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 MPDU1O75352 247 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
SRSF4-204ENST00000489898 HIST1H1EP10412 219 aaKnown RBP8.2□□□□□ -1.1
SRSF4-204ENST00000489898 ATP6V1FQ16864 119 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 ZNF493Q6ZR52 646 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 PPP1R1CQ8WVI7 109 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 LINC01587Q99440 93 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 VGLL1Q99990 258 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 LINC00467Q9BRT7 94 aa8.2□□□□□ -1.1
SRSF4-204ENST00000489898 NOP10Q9NPE3 64 aaKnown RBP8.2□□□□□ -1.1
SRSF4-204ENST00000489898 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 HMSDA8MTL9 139 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 EIF3GO75821 320 aaKnown RBP eCLIP8.19□□□□□ -1.1
SRSF4-204ENST00000489898 ATP5G1P05496 136 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 PVALBP20472 110 aaPredicted RBP8.19□□□□□ -1.1
SRSF4-204ENST00000489898 ATP5G3P48201 142 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 HBG1P69891 147 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 HBG2P69892 147 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 CLINT1Q14677 625 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 Q6ZRG5 221 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 C9orf47Q6ZRZ4 202 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 Q6ZTI0 123 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 C9orf62Q8N4C0 152 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 VSIG2Q96IQ7 327 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 C18orf15Q96N68 181 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 TMPRSS5Q9H3S3 457 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 WFDC1Q9HC57 220 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 RNF24Q9Y225 148 aa8.19□□□□□ -1.1
SRSF4-204ENST00000489898 TIMM8BQ9Y5J9 83 aaPredicted RBP8.19□□□□□ -1.1
SRSF4-204ENST00000489898 A0A0D9SG52 128 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 KANTRA0A1W2PQU2 76 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 E5RGE8 158 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 MPC2O95563 127 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 DAZ2Q13117 558 aaKnown RBP8.18□□□□□ -1.1
SRSF4-204ENST00000489898 S100A7AQ86SG5 101 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 OR10J6PQ8NGY7 276 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 Q8TAT8 98 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 MBD2Q9UBB5 411 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 TP53TG3Q9ULZ0 132 aa8.18□□□□□ -1.1
SRSF4-204ENST00000489898 C7orf71A4D174 169 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 F5H768 121 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 J3KRW8 73 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 FAM3BP58499 235 aaPredicted RBP8.17□□□□□ -1.1
SRSF4-204ENST00000489898 RAB31Q13636 194 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 ICAM4Q14773 271 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 LRRC20Q8TCA0 184 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 ATP5SQ99766 215 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 PYGO2Q9BRQ0 406 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 KRTAP4-5Q9BYR2 181 aa8.17□□□□□ -1.1
SRSF4-204ENST00000489898 TRAV26-1A0A087WT03 109 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 NBDYA0A0U1RRE5 68 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 SLC25A5P05141 298 aaKnown RBP8.16□□□□□ -1.1
SRSF4-204ENST00000489898 OR10J4P0C629 311 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 LEPP41159 167 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 TNP2Q05952 138 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 ZNF345Q14585 488 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 OR11H4Q8NGC9 324 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 BLNKQ8WV28 456 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 MRPL32Q9BYC8 188 aaKnown RBP8.16□□□□□ -1.1
SRSF4-204ENST00000489898 ZNF492Q9P255 531 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 FUT9Q9Y231 359 aa8.16□□□□□ -1.1
SRSF4-204ENST00000489898 G3V3Q6 166 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 SPINK4O60575 86 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 IFNA7P01567 189 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 HTN1P15515 57 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 TCL1AP56279 114 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 EIF5AP63241 154 aaKnown RBP8.15□□□□□ -1.1
SRSF4-204ENST00000489898 Q5BKY6 102 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 FAM122CQ6P4D5 195 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
SRSF4-204ENST00000489898 TMUB2Q71RG4 321 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 RXFP4Q8TDU9 374 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 GSN-AS1Q9NRJ2 163 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 TNFSF18Q9UNG2 199 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 PRELID1Q9Y255 219 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 KLF12Q9Y4X4 402 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 MYCBP2O75592 4640 aa8.15□□□□□ -1.1
SRSF4-204ENST00000489898 A0A096LPF7 62 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms