RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 PAIP2BQ9ULR5 123 aaKnown RBP4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 HIGD1AQ9Y241 93 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 FAT1Q14517 4588 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 C9orf170A2RU37 121 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 PRSS47A8MTI9 375 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 H3BNG1 76 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 H3BP45 60 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 H7BYZ3 331 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 ADAP1O75689 374 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 CCNKO75909 580 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 LINC00869P0C866 280 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 CXCL2P19875 107 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 CDKN1BP46527 198 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 POLR2GP62487 172 aaKnown RBP eCLIP4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 DLK1P80370 383 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 HIST1H1AQ02539 215 aaPredicted RBP4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 AKR1C1Q04828 323 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 FGL1Q08830 312 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 PYDC2Q56P42 97 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 PAPPA-AS1Q5QFB9 102 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 FAM122CQ6P4D5 195 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 WDR73Q6P4I2 378 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 SSX7Q7RTT5 188 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 CCDC190Q86UF4 302 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 MCFD2Q8NI22 146 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 RXFP4Q8TDU9 374 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 TMEM263Q8WUH6 116 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 RPUSD4Q96CM3 377 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 SAT2Q96F10 170 aaPredicted RBP4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 UHRF2Q96PU4 802 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 C20orf144Q9BQM9 153 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 UPK3BQ9BT76 320 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 Q9H3A6 140 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 NPVFQ9HCQ7 196 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 NOP10Q9NPE3 64 aaKnown RBP4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 ZNF331Q9NQX6 463 aaPredicted RBP4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 PSENENQ9NZ42 101 aa4.38□□□□□ -1.71
PRPF40A-210ENST00000489741 A0A1W2PPQ1 181 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 ZNF701M0R085 212 aaPredicted RBP4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 NDUFB6O95139 128 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 GAS8-AS1O95177 125 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 OR5G3P0C626 314 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 TAS2R30P59541 319 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 RHOBP62745 196 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 ARL16Q0P5N6 197 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 ESRGQ1W209 222 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 S100A7AQ86SG5 101 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 MAPKAPK5-AS1Q8N8E1 139 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 TMEM37Q8WXS4 190 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 GGACTQ9BVM4 153 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 ARV1Q9H2C2 271 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 FLVCR2Q9UPI3 526 aa4.37□□□□□ -1.71
PRPF40A-210ENST00000489741 TRAV26-1A0A087WT03 109 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 SLC17A3O00476 420 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 AGPAT2O15120 278 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 TSC22D2O75157 780 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 OR4E1P0C645 316 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 METTL15P1P0C7V9 234 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 CT45A10P0DMU9 189 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 IGLC2P0DOY2 106 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 PRB4P10163 310 aaPredicted RBP4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 HTN1P15515 57 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 M6PRP20645 277 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 BTCP35070 178 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 RRAS2P62070 204 aaPredicted RBP4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 DAZ2Q13117 558 aaKnown RBP4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 CLINT1Q14677 625 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 LCN15Q6UWW0 184 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 Q6ZRN7 208 aaPredicted RBP4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 LINC00305Q7Z4B0 112 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 SPATA12Q7Z6I5 190 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 OR10P1Q8NGE3 313 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 OR10J6PQ8NGY7 276 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 ZNF431Q8TF32 576 aaPredicted RBP4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 GNPNAT1Q96EK6 184 aaPredicted RBP4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 VSIG2Q96IQ7 327 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 C18orf15Q96N68 181 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 SLC50A1Q9BRV3 221 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 SRRQ9GZT4 340 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 ARL6Q9H0F7 186 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 RNF24Q9Y225 148 aa4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 MRPS16Q9Y3D3 137 aaKnown RBP4.36□□□□□ -1.71
PRPF40A-210ENST00000489741 A0A0J9YY99 117 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 LINC00854A0A1B0GVQ3 168 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 SMCO3A2RU48 225 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 C7orf66A4D0T2 115 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 NAP1L6A6NFF2 107 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 H3BQ15 152 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 SSSCA1O60232 199 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 ZNF324O75467 553 aaPredicted RBP4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 ANXA7P20073 488 aaKnown RBP4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 SLC38A11Q08AI6 406 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 OR5I1Q13606 314 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 OPCMLQ14982 345 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 BAK1Q16611 211 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 TTC32Q5I0X7 151 aa4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
PRPF40A-210ENST00000489741 ZNF546Q86UE3 836 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms