RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
TOP3B-217ENST00000489581 VPS13BQ7Z7G8 4022 aa11.53□□□□□ -0.56
TOP3B-217ENST00000489581 KLLNB2CW77 178 aa11.52□□□□□ -0.57
TOP3B-217ENST00000489581 PRAF2O60831 178 aa11.52□□□□□ -0.57
TOP3B-217ENST00000489581 MBPP02686 304 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-217ENST00000489581 AGPAT4-IT1Q9H0P7 198 aa11.52□□□□□ -0.57
TOP3B-217ENST00000489581 MRPL16Q9NX20 251 aaKnown RBP11.52□□□□□ -0.57
TOP3B-217ENST00000489581 TRAV9-2A0A087WT02 112 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 ZNF253O75346 499 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 MPDU1O75352 247 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 S100A5P33763 92 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 CRYBA4P53673 196 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 HAMPP81172 84 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 RAB31Q13636 194 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 MRPL23Q16540 153 aaKnown RBP11.51□□□□□ -0.57
TOP3B-217ENST00000489581 Q6ZQT7 251 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
TOP3B-217ENST00000489581 FAM19A4Q96LR4 140 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 C8orf49Q96NF6 230 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 HHLA3Q9XRX5 114 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 LY96Q9Y6Y9 160 aa11.51□□□□□ -0.57
TOP3B-217ENST00000489581 SRRM2Q9UQ35 2752 aaKnown RBP11.5□□□□□ -0.57
TOP3B-217ENST00000489581 TRBV19A0A075B6N1 114 aa11.5□□□□□ -0.57
TOP3B-217ENST00000489581 GPX1P07203 203 aa11.5□□□□□ -0.57
TOP3B-217ENST00000489581 GCSHP23434 173 aa11.5□□□□□ -0.57
TOP3B-217ENST00000489581 FHL2Q14192 279 aa11.5□□□□□ -0.57
TOP3B-217ENST00000489581 IBA57Q5T440 356 aaKnown RBP11.5□□□□□ -0.57
TOP3B-217ENST00000489581 NEGR1Q7Z3B1 354 aa11.5□□□□□ -0.57
TOP3B-217ENST00000489581 MSRB1Q9NZV6 116 aa11.5□□□□□ -0.57
TOP3B-217ENST00000489581 E5RGE8 158 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 L7N2F9 121 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 RGS13O14921 159 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 CST7O76096 145 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 NDUFB4O95168 129 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 INPP1P49441 399 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 BCAP31P51572 246 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 VAMP2P63027 116 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 SLAQ13239 276 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 PFDN5Q99471 154 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 VGLL1Q99990 258 aa11.49□□□□□ -0.57
TOP3B-217ENST00000489581 NAP1L6A6NFF2 107 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 CCSO14618 274 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 CRISP2P16562 243 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 BAK1Q16611 211 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 PRR9Q5T870 116 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 BLNKQ8WV28 456 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 ARPC5LQ9BPX5 153 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 SRRQ9GZT4 340 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 SLC39A9Q9NUM3 307 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 PRELID1Q9Y255 219 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 WDR83OSQ9Y284 106 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 LSM5Q9Y4Y9 91 aaKnown RBP11.48□□□□□ -0.57
TOP3B-217ENST00000489581 TIMM9Q9Y5J7 89 aa11.48□□□□□ -0.57
TOP3B-217ENST00000489581 IGHV1OR15-1A0A075B7D0 117 aa11.47□□□□□ -0.57
TOP3B-217ENST00000489581 IGKV2-40A0A087WW87 121 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-217ENST00000489581 FAM24AA6NFZ4 105 aa11.47□□□□□ -0.57
TOP3B-217ENST00000489581 FAM229AH3BQW9 127 aa11.47□□□□□ -0.57
TOP3B-217ENST00000489581 IGKV2D-40P01614 121 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-217ENST00000489581 PYYP10082 97 aa11.47□□□□□ -0.57
TOP3B-217ENST00000489581 HIST1H1EP10412 219 aaKnown RBP11.47□□□□□ -0.57
TOP3B-217ENST00000489581 CAV2P51636 162 aa11.47□□□□□ -0.57
TOP3B-217ENST00000489581 C12orf45Q8N5I9 185 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-217ENST00000489581 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
TOP3B-217ENST00000489581 MRPL32Q9BYC8 188 aaKnown RBP11.47□□□□□ -0.57
TOP3B-217ENST00000489581 UQCC1Q9NVA1 299 aa11.47□□□□□ -0.57
TOP3B-217ENST00000489581 TRGV4A0A0C4DH28 118 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 K7EQD1 137 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 SFTA3P0C7M3 94 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 EVI2AP22794 236 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 RPL29P47914 159 aaKnown RBP11.46□□□□□ -0.57
TOP3B-217ENST00000489581 TRIQKQ629K1 86 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 C9orf47Q6ZRZ4 202 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 MITD1Q8WV92 249 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 C20orf85Q9H1P6 137 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 TMEM14CQ9P0S9 112 aa11.46□□□□□ -0.57
TOP3B-217ENST00000489581 UBE2L5PA0A1B0GUS4 154 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 SRIP30626 198 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 BTCP35070 178 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 BAXQ07812 192 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 PDE6HQ13956 83 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 SPANXN2Q5MJ10 180 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 TMEM78Q5T7P6 136 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 FAM122CQ6P4D5 195 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
TOP3B-217ENST00000489581 FAM25EA8MYX2 175 aa11.44□□□□□ -0.58
TOP3B-217ENST00000489581 NMBP08949 121 aa11.44□□□□□ -0.58
TOP3B-217ENST00000489581 GYPEP15421 78 aa11.44□□□□□ -0.58
TOP3B-217ENST00000489581 ZNF415Q09FC8 603 aa11.44□□□□□ -0.58
TOP3B-217ENST00000489581 ZNF846Q147U1 533 aa11.44□□□□□ -0.58
TOP3B-217ENST00000489581 Q6ZSN1 163 aa11.44□□□□□ -0.58
TOP3B-217ENST00000489581 ZNF479Q96JC4 524 aa11.44□□□□□ -0.58
TOP3B-217ENST00000489581 CCDC160A6NGH7 325 aa11.43□□□□□ -0.58
TOP3B-217ENST00000489581 K7EP13 123 aa11.43□□□□□ -0.58
TOP3B-217ENST00000489581 CRYGDP07320 174 aa11.43□□□□□ -0.58
TOP3B-217ENST00000489581 VWC2Q2TAL6 325 aa11.43□□□□□ -0.58
TOP3B-217ENST00000489581 PCNPQ8WW12 178 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms