RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 C16orf54Q6UWD8 224 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 RBPMS2Q6ZRY4 209 aaKnown RBP4.91□□□□□ -1.62
SF3A3-208ENST00000489537 C19orf35Q6ZS72 473 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 Q8N2B8 174 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 RNF152Q8N8N0 203 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 NUDT10Q8NFP7 164 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 OR4X2Q8NGF9 303 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 FRZBQ92765 325 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BHQ93079 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 NUDT11Q96G61 164 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 UBE2E2Q96LR5 201 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 LINC00477Q96M19 166 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 MS4A10Q96PG2 267 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BNQ99877 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 HIST1H2BMQ99879 126 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 ASCL2Q99929 193 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 ABCA1O95477 2261 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 WNK2Q9Y3S1 2297 aa4.91□□□□□ -1.62
SF3A3-208ENST00000489537 C19orf71A6NCJ1 209 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 INAFM1C9JVW0 142 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 CD5LO43866 347 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 IGHV4-59P01825 116 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 RAB4AP20338 218 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 PSMB8P28062 276 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 NDUFA6P56556 154 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 PAFAH1B2P68402 229 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 HBBP68871 147 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 S100A12P80511 92 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 HIST1H1AQ02539 215 aaPredicted RBP4.9□□□□□ -1.63
SF3A3-208ENST00000489537 SMUG1Q53HV7 270 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 OR10J3Q5JRS4 329 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 LEMD1Q68G75 181 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 PRNTQ86SH4 94 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 ZFP82Q8N141 532 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 TMEM18Q96B42 140 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 NRN1Q9NPD7 142 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 RPH3ALQ9UNE2 315 aa4.9□□□□□ -1.63
SF3A3-208ENST00000489537 ATRQ13535 2644 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 IGHV7-4-1A0A0J9YVY3 117 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 PGPEP1LA6NFU8 196 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 FABP5P3A8MUU1 101 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 HIGD1CA8MV81 97 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 F2Z2F3 143 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 SLC17A3O00476 420 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 CHEK1O14757 476 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 IGHV3-23P01764 117 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 LGALS1P09382 135 aaKnown RBP4.89□□□□□ -1.63
SF3A3-208ENST00000489537 CRISP2P16562 243 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 RAB4BP61018 213 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 BLCAPP62952 87 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 GNG5P63218 68 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 Q0VG73 95 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 OR5I1Q13606 314 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 LCN12Q6JVE5 192 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 PRR27Q6MZM9 219 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 EXOC3-AS1Q8N2X6 119 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 OR10J6PQ8NGY7 276 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 ZNF418Q8TF45 676 aaPredicted RBP4.89□□□□□ -1.63
SF3A3-208ENST00000489537 C16orf92Q96LL3 132 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 PRR25Q96S07 402 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 RNASE7Q9H1E1 156 aaKnown RBP4.89□□□□□ -1.63
SF3A3-208ENST00000489537 AURKAIP1Q9NWT8 199 aaPredicted RBP4.89□□□□□ -1.63
SF3A3-208ENST00000489537 PEMTQ9UBM1 199 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 COL6A5A8TX70 2615 aa4.89□□□□□ -1.63
SF3A3-208ENST00000489537 HIVEP2P31629 2446 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.88□□□□□ -1.632e-7■■■□□ 18.7
SF3A3-208ENST00000489537 TRAV2A0A0B4J234 112 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 TRAV34A0A0B4J273 112 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 A0A1B0GUT8 65 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 CLPSL1A2RUU4 121 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 TMEM189A5PLL7 270 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 LINC01548A6NM66 108 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 A8MWP6 167 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 IGLV2-11P01706 119 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 APCSP02743 223 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 PMCHP20382 165 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 ZNF138P52744 262 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 CMC4P56277 68 aaPredicted RBP4.88□□□□□ -1.63
SF3A3-208ENST00000489537 SNRPD3P62318 126 aaKnown RBP4.88□□□□□ -1.63
SF3A3-208ENST00000489537 C9orf47Q6ZRZ4 202 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 SMIM15Q7Z3B0 74 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 NUP35Q8NFH5 326 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 OR2D3Q8NGH3 330 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 MYOZ3Q8TDC0 251 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 NEU1Q99519 415 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 SMPXQ9UHP9 88 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 S4R3C0 116 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 ANK2Q01484 3957 aa4.88□□□□□ -1.63
SF3A3-208ENST00000489537 ARHGAP32A7KAX9 2087 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 PHOX2AO14813 284 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 HOXA3O43365 443 aaPredicted RBP4.87□□□□□ -1.63
SF3A3-208ENST00000489537 ESDP10768 282 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 TSPOP30536 169 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 BAGE3Q86Y29 109 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
SF3A3-208ENST00000489537 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms