RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
MRPL55-230ENST00000489430 LINC00467Q9BRT7 94 aa13.45□□□□□ -0.26
MRPL55-230ENST00000489430 AGPAT4-IT1Q9H0P7 198 aa13.45□□□□□ -0.26
MRPL55-230ENST00000489430 RBAKDNA6NC62 111 aa13.44□□□□□ -0.26
MRPL55-230ENST00000489430 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
MRPL55-230ENST00000489430 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
MRPL55-230ENST00000489430 CSN1S1P47710 185 aa13.44□□□□□ -0.26
MRPL55-230ENST00000489430 UBE2L3P68036 154 aaKnown RBP13.44□□□□□ -0.26
MRPL55-230ENST00000489430 PQLC2Q6ZP29 291 aa13.44□□□□□ -0.26
MRPL55-230ENST00000489430 C15orf53Q8NAA6 179 aa13.44□□□□□ -0.26
MRPL55-230ENST00000489430 ZNF503Q96F45 646 aa13.44□□□□□ -0.26
MRPL55-230ENST00000489430 TRAV12-3A0A0B4J271 114 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 C7orf71A4D174 169 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 ATP5G1P05496 136 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 HTN3P15516 51 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 ATP5G3P48201 142 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 ERCC8Q13216 396 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 RGS21Q2M5E4 152 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 FAM122CQ6P4D5 195 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 ARL6IP6Q8N6S5 226 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 OR2G3Q8NGZ4 309 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 PHYHIPLQ96FC7 376 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 BIRC6Q9NR09 4857 aa13.43□□□□□ -0.26
MRPL55-230ENST00000489430 A0A1W2PPV4 95 aa13.42□□□□□ -0.26
MRPL55-230ENST00000489430 ZNF324O75467 553 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-230ENST00000489430 RANP62826 216 aaKnown RBP13.42□□□□□ -0.26
MRPL55-230ENST00000489430 RNF212Q495C1 297 aa13.42□□□□□ -0.26
MRPL55-230ENST00000489430 LINC00612Q8N6U2 182 aa13.42□□□□□ -0.26
MRPL55-230ENST00000489430 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
MRPL55-230ENST00000489430 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-230ENST00000489430 NOP10Q9NPE3 64 aaKnown RBP13.42□□□□□ -0.26
MRPL55-230ENST00000489430 ZNF492Q9P255 531 aa13.42□□□□□ -0.26
MRPL55-230ENST00000489430 SERF2P84101 59 aa13.41□□□□□ -0.26
MRPL55-230ENST00000489430 DAZ2Q13117 558 aaKnown RBP13.41□□□□□ -0.26
MRPL55-230ENST00000489430 TMEM88Q6PEY1 159 aa13.41□□□□□ -0.26
MRPL55-230ENST00000489430 ZNF680Q8NEM1 530 aa13.41□□□□□ -0.26
MRPL55-230ENST00000489430 Q9H3A6 140 aa13.41□□□□□ -0.26
MRPL55-230ENST00000489430 DNAH6Q9C0G6 4158 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-230ENST00000489430 SNURFLB1AK76 121 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-230ENST00000489430 MBP02144 154 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 GPX1P07203 203 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 ZNF138P52744 262 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 ANXA2RQ3ZCQ2 193 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 FAM74A1Q5RGS3 127 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 INO80EQ8NBZ0 244 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-230ENST00000489430 TMED6Q8WW62 240 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 VGLL1Q99990 258 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 LENEPQ9Y5L5 61 aa13.4□□□□□ -0.26
MRPL55-230ENST00000489430 J3KRW8 73 aa13.39□□□□□ -0.27
MRPL55-230ENST00000489430 FAM3BP58499 235 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-230ENST00000489430 ZFAND2AQ8N6M9 145 aa13.39□□□□□ -0.27
MRPL55-230ENST00000489430 OR10G4Q8NGN3 311 aa13.39□□□□□ -0.27
MRPL55-230ENST00000489430 OR10G9Q8NGN4 311 aa13.39□□□□□ -0.27
MRPL55-230ENST00000489430 OR10G7Q8NGN6 311 aa13.39□□□□□ -0.27
MRPL55-230ENST00000489430 OTORQ9NRC9 128 aa13.39□□□□□ -0.27
MRPL55-230ENST00000489430 F5H768 121 aa13.38□□□□□ -0.27
MRPL55-230ENST00000489430 CD300CQ08708 224 aa13.38□□□□□ -0.27
MRPL55-230ENST00000489430 EIF4E3Q8N5X7 224 aaKnown RBP13.38□□□□□ -0.27
MRPL55-230ENST00000489430 DIRC3C9JPN6 131 aa13.37□□□□□ -0.27
MRPL55-230ENST00000489430 RNASE4P34096 147 aaKnown RBP13.37□□□□□ -0.27
MRPL55-230ENST00000489430 RAB2AP61019 212 aa13.37□□□□□ -0.27
MRPL55-230ENST00000489430 BTN1A1Q13410 526 aa13.37□□□□□ -0.27
MRPL55-230ENST00000489430 Q5BKY6 102 aa13.37□□□□□ -0.27
MRPL55-230ENST00000489430 HSD17B11Q8NBQ5 300 aa13.37□□□□□ -0.27
MRPL55-230ENST00000489430 OR2T35Q8NGX2 323 aa13.37□□□□□ -0.27
MRPL55-230ENST00000489430 C18orf15Q96N68 181 aa13.37□□□□□ -0.27
MRPL55-230ENST00000489430 ATP6V0CP27449 155 aa13.36□□□□□ -0.27
MRPL55-230ENST00000489430 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
MRPL55-230ENST00000489430 UBE2DNLQ8IWF7 75 aa13.36□□□□□ -0.27
MRPL55-230ENST00000489430 CMTM2Q8TAZ6 248 aa13.36□□□□□ -0.27
MRPL55-230ENST00000489430 GNPNAT1Q96EK6 184 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-230ENST00000489430 TNFSF18Q9UNG2 199 aa13.36□□□□□ -0.27
MRPL55-230ENST00000489430 BORCS7-ASMTA0A0B4J1R7 106 aa13.35□□□□□ -0.27
MRPL55-230ENST00000489430 STAG3L2P0CL84 134 aa13.35□□□□□ -0.27
MRPL55-230ENST00000489430 STAG3L3P0CL85 134 aa13.35□□□□□ -0.27
MRPL55-230ENST00000489430 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-230ENST00000489430 LGALS9BQ3B8N2 356 aa13.35□□□□□ -0.27
MRPL55-230ENST00000489430 C11orf72Q8NBR9 251 aa13.35□□□□□ -0.27
MRPL55-230ENST00000489430 RNF222A6NCQ9 220 aa13.34□□□□□ -0.27
MRPL55-230ENST00000489430 PGPA6NDG6 321 aa13.34□□□□□ -0.27
MRPL55-230ENST00000489430 RGS13O14921 159 aa13.34□□□□□ -0.27
MRPL55-230ENST00000489430 SUN5Q8TC36 379 aa13.34□□□□□ -0.27
MRPL55-230ENST00000489430 FRAS1Q86XX4 4008 aa13.34□□□□□ -0.27
MRPL55-230ENST00000489430 IGHV1OR15-1A0A075B7D0 117 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 FXYD6-FXYD2A0A087WZ82 144 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 SERTM2A0A1B0GWG4 89 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 H3BNG1 76 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 TCL1AP56279 114 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 LINC00336Q6ZUF6 198 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 Q8TAT8 98 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 RAB24Q969Q5 203 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 ST6GAL2Q96JF0 529 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 DNAH10Q8IVF4 4471 aa13.33□□□□□ -0.28
MRPL55-230ENST00000489430 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 TAAR5O14804 337 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 GAGE7O76087 117 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
MRPL55-230ENST00000489430 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms