RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 UBE2L3P68036 154 aaKnown RBP4.62□□□□□ -1.67
PTPRD-212ENST00000488774 ZNF266Q14584 549 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 TMUB2Q71RG4 321 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 ZNF575Q86XF7 245 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 LRRC20Q8TCA0 184 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 PHLDA1Q8WV24 401 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-212ENST00000488774 LINC00479Q96M42 142 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 PSMG3Q9BT73 122 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-212ENST00000488774 C11orf21Q9P2W6 132 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 DKK2Q9UBU2 259 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 PFDN2Q9UHV9 154 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 LCE6AA0A183 80 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 LOC102723971A0A1B0GUV8 181 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 PGPA6NDG6 321 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 HMSDA8MTL9 139 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 KLLNB2CW77 178 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 DIRC3C9JPN6 131 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 C17orf112F2Z3M2 114 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 MIFP14174 115 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 CDC34P49427 236 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-212ENST00000488774 ZNF80P51504 273 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-212ENST00000488774 CCL20P78556 96 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 PDE6HQ13956 83 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 GUK1Q16774 197 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 ACOT6Q3I5F7 207 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-212ENST00000488774 TMEM41BQ5BJD5 291 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 FAM222AQ5U5X8 452 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-212ENST00000488774 C9orf47Q6ZRZ4 202 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 TCTE3Q8IZS6 198 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 INO80EQ8NBZ0 244 aaPredicted RBP4.61□□□□□ -1.67
PTPRD-212ENST00000488774 C11orf45Q8TAV5 145 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 RNASE8Q8TDE3 154 aaKnown RBP4.61□□□□□ -1.67
PTPRD-212ENST00000488774 ASB13Q8WXK3 278 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 HYLS1Q96M11 299 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 C8orf49Q96NF6 230 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 NEU1Q99519 415 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 RPH3ALQ9UNE2 315 aa4.61□□□□□ -1.67
PTPRD-212ENST00000488774 TRAV34A0A0B4J273 112 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 A0A1B0GV50 99 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 CXorf65A6NEN9 183 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 F6UZH7 168 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 BCL2L11O43521 198 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 DUSP14O95147 198 aaKnown RBP4.6□□□□□ -1.67
PTPRD-212ENST00000488774 HTN1P15515 57 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 RNASE4P34096 147 aaKnown RBP4.6□□□□□ -1.67
PTPRD-212ENST00000488774 CDKN1BP46527 198 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 UBE2G2P60604 165 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 ZNF345Q14585 488 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 KHDC3LQ587J8 217 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 GOLT1AQ6ZVE7 132 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 C9orf62Q8N4C0 152 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 C11orf72Q8NBR9 251 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 TMED6Q8WW62 240 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 MRPL53Q96EL3 112 aaKnown RBP4.6□□□□□ -1.67
PTPRD-212ENST00000488774 ZNF492Q9P255 531 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 APLNQ9ULZ1 77 aa4.6□□□□□ -1.67
PTPRD-212ENST00000488774 FAM74A7A6NL05 159 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 INSP01308 110 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 CRISP2P16562 243 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 ATP5G3P48201 142 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 SERF2P84101 59 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 FAM74A1Q5RGS3 127 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 TMEM75Q8N9X5 138 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 OR10J6PQ8NGY7 276 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 LINC01587Q99440 93 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 ARPC5LQ9BPX5 153 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 OTORQ9NRC9 128 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 KLF12Q9Y4X4 402 aa4.59□□□□□ -1.67
PTPRD-212ENST00000488774 CTXND1A0A1B0GTU2 59 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 A0A1W2PPV4 95 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 C7orf71A4D174 169 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 C1QBP02746 253 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 HOXA5P20719 270 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 CRIP1P50238 77 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 ZNF138P52744 262 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 NUTF2P61970 127 aaKnown RBP4.58□□□□□ -1.68
PTPRD-212ENST00000488774 SUMO1P63165 101 aaKnown RBP4.58□□□□□ -1.68
PTPRD-212ENST00000488774 MUC21Q5SSG8 566 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 SAMD13Q5VXD3 122 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 PQLC2Q6ZP29 291 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 Q6ZTI0 123 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 CCDC28AQ8IWP9 274 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 LINC00612Q8N6U2 182 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 LINC00476Q8WZB0 136 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 ODF3Q96PU9 254 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 ZNF471Q9BX82 626 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-212ENST00000488774 C1QTNF4Q9BXJ3 329 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 ACTR3CQ9C0K3 210 aaPredicted RBP4.58□□□□□ -1.68
PTPRD-212ENST00000488774 NOP10Q9NPE3 64 aaKnown RBP4.58□□□□□ -1.68
PTPRD-212ENST00000488774 GSN-AS1Q9NRJ2 163 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 KCNIP2Q9NS61 270 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 MDFICQ9P1T7 246 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 GOLT1BQ9Y3E0 138 aa4.58□□□□□ -1.68
PTPRD-212ENST00000488774 BORCS7-ASMTA0A0B4J1R7 106 aa4.57□□□□□ -1.68
PTPRD-212ENST00000488774 MAP1LC3B2A6NCE7 125 aa4.57□□□□□ -1.68
PTPRD-212ENST00000488774 IGLL5B9A064 214 aa4.57□□□□□ -1.68
PTPRD-212ENST00000488774 TAAR5O14804 337 aa4.57□□□□□ -1.68
PTPRD-212ENST00000488774 GNRH2O43555 120 aa4.57□□□□□ -1.68
PTPRD-212ENST00000488774 JTBO76095 146 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms