RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 COTL1Q14019 142 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 Q86TA4 180 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 MRPL53Q96EL3 112 aaKnown RBP9.67□□□□□ -0.86
NELFE-209ENST00000488426 CITED1Q99966 193 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 SMPXQ9UHP9 88 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 URGCP-MRPS24S4R325 110 aa9.67□□□□□ -0.86
NELFE-209ENST00000488426 IGLV2-11P01706 119 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 S100A2P29034 98 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 ERVFC1-1P60608 527 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 PSG3Q16557 428 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 TM4SF20Q53R12 229 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 TCTEX1D4Q5JR98 221 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 C8orf86Q6ZUL3 223 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 TRBV24-1A0A075B6N3 115 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 CHEK1O14757 476 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 PFN1P07737 140 aaKnown RBP9.66□□□□□ -0.86
NELFE-209ENST00000488426 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
NELFE-209ENST00000488426 GAGE1Q13065 139 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 OR5I1Q13606 314 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 KCNIP4Q6PIL6 250 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 FAM231DQ6ZW35 169 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 RHPN1-AS1Q9BWJ2 59 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 ZFP30Q9Y2G7 519 aa9.66□□□□□ -0.86
NELFE-209ENST00000488426 A0A1B0GUS0 222 aa9.65□□□□□ -0.86
NELFE-209ENST00000488426 LINC00614P0C842 121 aa9.65□□□□□ -0.86
NELFE-209ENST00000488426 TMEM183AQ8IXX5 376 aa9.65□□□□□ -0.86
NELFE-209ENST00000488426 NHLRC2Q8NBF2 726 aa9.65□□□□□ -0.86
NELFE-209ENST00000488426 NDUFAF3Q9BU61 184 aa9.65□□□□□ -0.86
NELFE-209ENST00000488426 PRKDCP78527 4128 aaKnown RBP9.65□□□□□ -0.87
NELFE-209ENST00000488426 TRAV8-1A0A0A6YYK1 113 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 IBA57Q5T440 356 aaKnown RBP9.64□□□□□ -0.87
NELFE-209ENST00000488426 LCN12Q6JVE5 192 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 PRNTQ86SH4 94 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 BTF3L4Q96K17 158 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 SGK494Q96LW2 274 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 PYGO2Q9BRQ0 406 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 PSG8Q9UQ74 426 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 V9GYV3 84 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 TGIF2-C20orf24A0A0A6YYL0 155 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 LINC01619G3V211 115 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 CXCL1P09341 107 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 KHDC1LQ5JSQ8 128 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 SAMD13Q5VXD3 122 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 C11orf44Q8N8P7 122 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 RNASE7Q9H1E1 156 aaKnown RBP9.64□□□□□ -0.87
NELFE-209ENST00000488426 NRN1Q9NPD7 142 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 IL36BQ9NZH7 164 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 ZNF492Q9P255 531 aa9.64□□□□□ -0.87
NELFE-209ENST00000488426 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 WIPF1O43516 503 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 HLA-DMBP28068 263 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 KLF5Q13887 457 aaPredicted RBP9.63□□□□□ -0.87
NELFE-209ENST00000488426 KLHL30-AS1Q8NEE0 82 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 DPF1Q92782 380 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 FAM210BQ96KR6 192 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 C16orf92Q96LL3 132 aa9.63□□□□□ -0.87
NELFE-209ENST00000488426 NOTCH3Q9UM47 2321 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 TRAV9-1A0A075B6T8 112 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 IGKV2-40A0A087WW87 121 aaPredicted RBP9.62□□□□□ -0.87
NELFE-209ENST00000488426 SOCS3O14543 225 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 IGKV2D-40P01614 121 aaPredicted RBP9.62□□□□□ -0.87
NELFE-209ENST00000488426 IGFL4Q6B9Z1 124 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 C18orf65Q6ZTR6 163 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 OR1N2Q8NGR9 330 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 PRR27Q6MZM9 219 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 TCF24Q7RTU0 167 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 RNF182Q8N6D2 247 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 OR11H1Q8NG94 326 aa9.62□□□□□ -0.87
NELFE-209ENST00000488426 A0A1W2PPQ1 181 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 ZNF705GA8MUZ8 300 aaPredicted RBP9.61□□□□□ -0.87
NELFE-209ENST00000488426 ZNF705FA8MVS1 300 aaPredicted RBP9.61□□□□□ -0.87
NELFE-209ENST00000488426 DLEU1O43261 78 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 RPL11P62913 178 aaKnown RBP9.61□□□□□ -0.87
NELFE-209ENST00000488426 DEFB136Q30KP8 78 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 COX8CQ7Z4L0 72 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 OR10D4PQ8NGN7 298 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 TGP01266 2768 aa9.61□□□□□ -0.87
NELFE-209ENST00000488426 TMEM238LA0A1B0GVL6 79 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 C19orf71A6NCJ1 209 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 C2orf70A6NJV1 201 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 M0QZ24 198 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 CBLN1P23435 193 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 SLURP1P55000 103 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 HIST3H2BBQ8N257 126 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 PEMTQ9UBM1 199 aa9.6□□□□□ -0.87
NELFE-209ENST00000488426 TSSC4Q9Y5U2 329 aaPredicted RBP9.6□□□□□ -0.87
NELFE-209ENST00000488426 TYMSP04818 313 aa9.59□□□□□ -0.87
NELFE-209ENST00000488426 CD28P10747 220 aa9.59□□□□□ -0.87
NELFE-209ENST00000488426 EDN2P20800 178 aa9.59□□□□□ -0.87
NELFE-209ENST00000488426 RPS10P46783 165 aaKnown RBP9.59□□□□□ -0.87
NELFE-209ENST00000488426 FAM3BP58499 235 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms